Regulog TauR - Oceanospirillales/Alteromonadales

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:	Taurine utilization
Effector:	Taurine
Phylum:	Proteobacteria/gamma
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 3 sites [see more]

Member of regulog collections

By taxonomy - Oceanospirillales/Alteromonadales
By TF family - GntR/MocR
By effector - Taurine
By pathway - Taurine utilization

Statistics of regulated genes
Genome	Genes	Operons
Alcanivorax borkumensis SK2
Chromohalobacter salexigens DSM 3043	5	2
Hahella chejuensis KCTC 2396
Marinomonas sp. MWYL1
Oceanobacter sp. RED65
Oceanospirillum sp. MED92	3	1
Reinekea sp. MED297
Teredinibacter turnerae T7901
Saccharophagus degradans 2-40
Marinobacter sp. ELB17
Marinobacter aqueolei
Cellvibrio japonicus Ueda107

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes													Function

CRON 1.
Csal_0156	Alcanivorax borkumensis SK2	* Chromohalobacter salexigens DSM 3043 Site: position = -155 score = 8.69253 sequence = CTGGCCAACC-(12)-CTGGCTCTAT Gene: Csal_0156: Amino acid ABC transporter, extracellular solute-binding protein, family 3	Hahella chejuensis KCTC 2396	Marinomonas sp. MWYL1	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Reinekea sp. MED297	Teredinibacter turnerae T7901	Saccharophagus degradans 2-40	Marinobacter sp. ELB17	Marinobacter aqueolei	Cellvibrio japonicus Ueda107	Amino acid ABC transporter, extracellular solute-binding protein, family 3
Csal_0155	Alcanivorax borkumensis SK2	Chromohalobacter salexigens DSM 3043 Gene: Csal_0155: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine	Hahella chejuensis KCTC 2396	Marinomonas sp. MWYL1	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Reinekea sp. MED297	Teredinibacter turnerae T7901	Saccharophagus degradans 2-40	Marinobacter sp. ELB17	Marinobacter aqueolei	Cellvibrio japonicus Ueda107	Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine
Csal_0154	Alcanivorax borkumensis SK2	Chromohalobacter salexigens DSM 3043 Gene: Csal_0154: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine	Hahella chejuensis KCTC 2396	Marinomonas sp. MWYL1	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Reinekea sp. MED297	Teredinibacter turnerae T7901	Saccharophagus degradans 2-40	Marinobacter sp. ELB17	Marinobacter aqueolei	Cellvibrio japonicus Ueda107	Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine
Csal_0153	Alcanivorax borkumensis SK2	Chromohalobacter salexigens DSM 3043 Gene: Csal_0153: Amino acid ABC transporter, ATP-binding protein	Hahella chejuensis KCTC 2396	Marinomonas sp. MWYL1	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Reinekea sp. MED297	Teredinibacter turnerae T7901	Saccharophagus degradans 2-40	Marinobacter sp. ELB17	Marinobacter aqueolei	Cellvibrio japonicus Ueda107	Amino acid ABC transporter, ATP-binding protein

CRON 2.
tpa	Alcanivorax borkumensis SK2	* Chromohalobacter salexigens DSM 3043 Site: position = -107 score = 7.32368 sequence = CTGTCACGGC-(12)-CTGGCTCTAT Gene: Csal_0158: Taurine--pyruvate aminotransferase (EC 2.6.1.77)	Hahella chejuensis KCTC 2396	Marinomonas sp. MWYL1	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Reinekea sp. MED297	Teredinibacter turnerae T7901	Saccharophagus degradans 2-40	Marinobacter sp. ELB17	Marinobacter aqueolei	Cellvibrio japonicus Ueda107	Taurine--pyruvate aminotransferase (EC 2.6.1.77)

CRON 3.
tauA	Alcanivorax borkumensis SK2	Chromohalobacter salexigens DSM 3043	Hahella chejuensis KCTC 2396	Marinomonas sp. MWYL1	Oceanobacter sp. RED65	* Oceanospirillum sp. MED92 Site: position = -94 score = 9.53597 sequence = CTGGACCAAT-(12)-CTGGCTCTAT Gene: MED92_13206: Taurine-binding periplasmic protein TauA	Reinekea sp. MED297	Teredinibacter turnerae T7901	Saccharophagus degradans 2-40	Marinobacter sp. ELB17	Marinobacter aqueolei	Cellvibrio japonicus Ueda107	Taurine-binding periplasmic protein TauA
tauB	Alcanivorax borkumensis SK2	Chromohalobacter salexigens DSM 3043	Hahella chejuensis KCTC 2396	Marinomonas sp. MWYL1	Oceanobacter sp. RED65	Oceanospirillum sp. MED92 Gene: MED92_13201: Taurine transport ATP-binding protein TauB	Reinekea sp. MED297	Teredinibacter turnerae T7901	Saccharophagus degradans 2-40	Marinobacter sp. ELB17	Marinobacter aqueolei	Cellvibrio japonicus Ueda107	Taurine transport ATP-binding protein TauB
tauC	Alcanivorax borkumensis SK2	Chromohalobacter salexigens DSM 3043	Hahella chejuensis KCTC 2396	Marinomonas sp. MWYL1	Oceanobacter sp. RED65	Oceanospirillum sp. MED92 Gene: MED92_13196: Taurine transport system permease protein TauC	Reinekea sp. MED297	Teredinibacter turnerae T7901	Saccharophagus degradans 2-40	Marinobacter sp. ELB17	Marinobacter aqueolei	Cellvibrio japonicus Ueda107	Taurine transport system permease protein TauC

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog TauR - Oceanospirillales/Alteromonadales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --