Regulog Svir_39240 - Frankineae/Propionibacterineae/Pseudonocardiaceae

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Multidrug resistance; Multidrug efflux
Effector:
Phylum:	Actinobacteria
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 2 sites [see more]

Member of regulog collections

By taxonomy - Frankineae/Propionibacterineae/Pseudonocardiaceae
By TF family - GntR/Others
By pathway - Multidrug resistance
By pathway - Multidrug efflux

Statistics of regulated genes
Genome	Genes	Operons
Actinosynnema mirum DSM 43827
Saccharomonospora viridis DSM 43017	3	1
Saccharopolyspora erythraea NRRL 2338
Acidothermus cellulolyticus 11B
Frankia sp. CcI3
Frankia sp. EAN1pec
Nakamurella multipartita DSM 44233	3	1
Nocardioides sp. JS614
Propionibacterium acnes KPA171202

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes										Function

CRON 1.
Svir_39240	Actinosynnema mirum DSM 43827	* Saccharomonospora viridis DSM 43017 Site: position = -45 score = 5.71115 sequence = CATGGTTACCTACATGACTAATGAACCCAG Gene: Svir_39240: Transcriptional regulator, GntR family	Saccharopolyspora erythraea NRRL 2338	Acidothermus cellulolyticus 11B	Frankia sp. CcI3	Frankia sp. EAN1pec	* Nakamurella multipartita DSM 44233 Site: position = -43 score = 5.79386 sequence = ATGGGTACATTAGTGGAGTAACTAACCACT Gene: Namu_4757: Transcriptional regulator, GntR family	Nocardioides sp. JS614	Propionibacterium acnes KPA171202	Transcriptional regulator, GntR family
lp_2743	Actinosynnema mirum DSM 43827	Saccharomonospora viridis DSM 43017 Gene: Svir_39230: ABC-type multidrug transport system, ATPase component	Saccharopolyspora erythraea NRRL 2338	Acidothermus cellulolyticus 11B	Frankia sp. CcI3	Frankia sp. EAN1pec	Nakamurella multipartita DSM 44233 Gene: Namu_4756: ABC-type multidrug transport system, ATPase component	Nocardioides sp. JS614	Propionibacterium acnes KPA171202	ABC-type multidrug transport system, ATPase component
lp_2744	Actinosynnema mirum DSM 43827	Saccharomonospora viridis DSM 43017 Gene: Svir_39220: ABC-type multidrug transport system, permease component	Saccharopolyspora erythraea NRRL 2338	Acidothermus cellulolyticus 11B	Frankia sp. CcI3	Frankia sp. EAN1pec	Nakamurella multipartita DSM 44233 Gene: Namu_4755: ABC-type multidrug transport system, permease component	Nocardioides sp. JS614	Propionibacterium acnes KPA171202	ABC-type multidrug transport system, permease component

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog Svir_39240 - Frankineae/Propionibacterineae/Pseudonocardiaceae

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --