Regulog FabR - Oceanospirillales/Alteromonadales

Properties
Regulator type:	Transcription factor
Regulator family:	TetR
Regulation mode:	repressor
Biological process:	Fatty acid biosynthesis
Effector:	Unsaturated acyl-ACP; Unsaturated acyl-CoA
Phylum:	Proteobacteria/gamma
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 8 sites [see more]

Member of regulog collections

By taxonomy - Oceanospirillales/Alteromonadales
By trascription factor - FabR
By TF family - TetR
By effector - Unsaturated acyl-ACP
By effector - Unsaturated acyl-CoA
By pathway - Fatty acid biosynthesis

Statistics of regulated genes
Genome	Genes	Operons
Hahella chejuensis KCTC 2396	1	1
Marinobacter aqueolei	5	5
Marinobacter sp. ELB17	2	2
Oceanobacter sp. RED65
Oceanospirillum sp. MED92
Marinomonas sp. MWYL1
Saccharophagus degradans 2-40
Teredinibacter turnerae T7901
Cellvibrio japonicus Ueda107
Chromohalobacter salexigens DSM 3043
Reinekea sp. MED297
Alcanivorax borkumensis SK2

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes													Function

CRON 1.
desA	Hahella chejuensis KCTC 2396	* Marinobacter aqueolei Site: position = -71 score = 5.57894 sequence = AGCTAACAAGTGTGCGCT Gene: Maqu_2215: Fatty acid desaturase (EC 1.14.99.-)	Marinobacter sp. ELB17	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Marinomonas sp. MWYL1	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Cellvibrio japonicus Ueda107	Chromohalobacter salexigens DSM 3043	Reinekea sp. MED297	Alcanivorax borkumensis SK2	Fatty acid desaturase (EC 1.14.99.-)

CRON 2.
hyIII	Hahella chejuensis KCTC 2396 Gene: HCH_04808: COG1272: Predicted membrane protein hemolysin III homolog	* Marinobacter aqueolei Site: position = -75 score = 5.84555 sequence = TGCGTACACTTGTACGCT Gene: Maqu_3135: COG1272: Predicted membrane protein hemolysin III homolog	Marinobacter sp. ELB17	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Marinomonas sp. MWYL1 Gene: Mmwyl1_3326: COG1272: Predicted membrane protein hemolysin III homolog	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Cellvibrio japonicus Ueda107	Chromohalobacter salexigens DSM 3043 Gene: Csal_0114: COG1272: Predicted membrane protein hemolysin III homolog	Reinekea sp. MED297 Gene: MED297_00660: COG1272: Predicted membrane protein hemolysin III homolog	Alcanivorax borkumensis SK2 Gene: ABO_2634: COG1272: Predicted membrane protein hemolysin III homolog	COG1272: Predicted membrane protein hemolysin III homolog

CRON 3.
Maqu_3149	Hahella chejuensis KCTC 2396	* Marinobacter aqueolei Site: position = -65 score = 5.76157 sequence = GGCTAACATGTGTACGCT Gene: Maqu_3149: AraC family transcriptional regulator	* Marinobacter sp. ELB17 Site: position = -94 score = 6.00433 sequence = AGCTAACATCTGTACGCT Gene: MELB17_04227: AraC family transcriptional regulator	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Marinomonas sp. MWYL1	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Cellvibrio japonicus Ueda107	Chromohalobacter salexigens DSM 3043	Reinekea sp. MED297	Alcanivorax borkumensis SK2	AraC family transcriptional regulator

CRON 4.
plsC	Hahella chejuensis KCTC 2396	* Marinobacter aqueolei Site: position = -45 score = 5.21066 sequence = GGCGTACACTTGTGCGCC Gene: Maqu_3682: 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)	* Marinobacter sp. ELB17 Site: position = -46 score = 5.21066 sequence = GGCGTACACTTGTGCGCC Gene: MELB17_01980: 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)	Oceanobacter sp. RED65 Gene: RED65_12104: 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)	Oceanospirillum sp. MED92	Marinomonas sp. MWYL1 Gene: Mmwyl1_4060: 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Cellvibrio japonicus Ueda107	Chromohalobacter salexigens DSM 3043	Reinekea sp. MED297	Alcanivorax borkumensis SK2	1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)

CRON 5.
OLE1	* Hahella chejuensis KCTC 2396 Site: position = -51 score = 6.41738 sequence = AGCGTACACTTGTACGCT Gene: HCH_00568: Fatty acid desaturase (EC 1.14.19.1)	* Marinobacter aqueolei Site: position = -109 score = 6.10392 sequence = GGCTTACACCTGTACGCT Gene: Maqu_3748: Fatty acid desaturase (EC 1.14.19.1)	Marinobacter sp. ELB17	Oceanobacter sp. RED65 Gene: RED65_11650: Fatty acid desaturase (EC 1.14.19.1)	Oceanospirillum sp. MED92	Marinomonas sp. MWYL1	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Cellvibrio japonicus Ueda107	Chromohalobacter salexigens DSM 3043	Reinekea sp. MED297	Alcanivorax borkumensis SK2 Gene: ABO_2585: Fatty acid desaturase (EC 1.14.19.1)	Fatty acid desaturase (EC 1.14.19.1)

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog FabR - Oceanospirillales/Alteromonadales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --