Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of Rex regulog to Geobacillus sp. WCH70

Reference regulog properties
Source regulog: Rex - Bacillales
Regulator type: Transcription factor
Regulator family: Rex
Regulation mode: repressor
Biological process: Energy metabolism
Effector: NADH
Phylum: Firmicutes
Propagated regulon:
Target genome Geobacillus sp. WCH70
Orthologous TF(s) GWCH70_0224
Regulated genes 4
Built upon 64 sites [see more]
Predicted regulatory interactions in Geobacillus sp. WCH70
Locus tag Position Score Sequence
Position: -72
Score: 6
Sequence: TTTGCGAAATAATGCACAAT
Position: -49
Score: 6.2
Sequence: TTTGTGAATAATTTCACAAA
Locus tag: GWCH70_0489
GWCH70_0489 -72 6 TTTGCGAAATAATGCACAAT
-49 6.2 TTTGTGAATAATTTCACAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ldh
Ortholog function: L-lactate dehydrogenase (EC 1.1.1.27)
Bacillus subtilis subsp. subtilis str. 168 BSU03050 -85 6 TTTGTGAAGTGTTGCACAAT
-62 6 AATGTGAAATACTTCACAAA
Bacillus amyloliquefaciens FZB42 RBAM_003290 -82 6.3 TTTGTGAAGTATTGCACAAT
-59 5.6 AATGTGAAATACTTCACAAG
Bacillus pumilus SAFR-032 BPUM_0277 -79 6.3 TTTGTGAAGTATTGCACAAT
-56 5.7 AATGTGAAATACTTCACATA
Bacillus licheniformis DSM 13 BLi00366 -82 6 TATGTGAAGTATTGCACAAT
-59 5.8 AATGTGAAGAATTTCACAAA
Anoxybacillus flavithermus WK1 Aflv_0889 -58 5.4 TTTGTGAAACAGTGTACAAT
Geobacillus kaustophilus HTA426 GK0475 -42 5.5 AATGTGAATATATTCACAAA
Bacillus halodurans C-125 BH3937 -276 6.2 AATGTGAAATATTTCACAAA
-219 5.7 CATGTGAAATATTTCACAAA
-44 5.1 CATGTGAAAATATTCACAAA
Bacillus clausii KSM-K16 ABC2872 -68 6.4 TTTGTGAAATAATGCACAAT
-45 5.9 AATGTGAATAATTTCACAAA
Oceanobacillus iheyensis HTE831 OB3279 -68 6.5 TTTGTGAAATATTTCACAAT
Position: -46
Score: 5.3
Sequence: AATGTGAAAAAAATCACAAA
Locus tag: GWCH70_1450
GWCH70_1450 -46 5.3 AATGTGAAAAAAATCACAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ywcJ
Ortholog function: Formate/nitrite family of transporters
Bacillus subtilis subsp. subtilis str. 168 BSU38060 -66 6.4 ATTGTGAAATACTTCACAAT
Bacillus licheniformis DSM 13 BLi04135 -89 6.2 TTTGTGAAATGTTTCACAAT
Anoxybacillus flavithermus WK1 Aflv_1436 -43 4.9 AGTGTGAAAAACATCACAAA
Bacillus cereus ATCC 14579 BC1308 -103 6.1 TTTGTGAAACATTGCACAAA
Position: -101
Score: 5.3
Sequence: AACGTGAATAATTTCACAAA
Locus tag: GWCH70_2884
GWCH70_2884 -101 5.3 AACGTGAATAATTTCACAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ndh2
Ortholog function: NADH dehydrogenase (EC 1.6.99.3)
Bacillus licheniformis DSM 13 BLi03392 -119 4.9 AAAGTGAAGGGTTTCACAAA
Anoxybacillus flavithermus WK1 Aflv_2402 -76 5.5 TTCGTGAATAAATTCACAAA
Geobacillus kaustophilus HTA426 GK2953 -102 5.6 AACGTGAATTATTTCACAAA
Bacillus clausii KSM-K16 ABC2924 -55 4.8 AAAGTGAAATGAATCACAAA
Paenibacillus sp. JDR-2 Pjdr2_4834 -64 5.7 ATTGTGTAATTTTTCACAAA
Position: -135
Score: 6.1
Sequence: ATTGTTCAATATTTCACAAA
Locus tag: GWCH70_3390
GWCH70_3390 -135 6.1 ATTGTTCAATATTTCACAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: pflB
Ortholog function: Pyruvate formate-lyase (EC 2.3.1.54)
Bacillus licheniformis DSM 13 BLi02132 -119 6 TTTGTTAACTATTTCACAAA
Anoxybacillus flavithermus WK1 Aflv_2793 -117 5 TTTGATCAACTTTTCACAAA
Bacillus cereus ATCC 14579 BC0491 -129 5.5 TTTGCTCAACATTTCACAAA
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