Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of LexA regulog to Bacillus sp. NRRL B-14911

Reference regulog properties
Source regulog: LexA - Bacillales
Regulator type: Transcription factor
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus sp. NRRL B-14911
Orthologous TF(s) B14911_09217
Regulated genes 7
Built upon 206 sites [see more]
Predicted regulatory interactions in Bacillus sp. NRRL B-14911
Locus tag Position Score Sequence
Position: -34
Score: 5.4
Sequence: AAGAACATATGTTTGT
Locus tag: B14911_19310
B14911_19310 -34 5.4 AAGAACATATGTTTGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: pcrA
Ortholog function: ATP-dependent DNA helicase
Bacillus subtilis subsp. subtilis str. 168 BSU06610 -36 4.4 TAGAACGTATGTTTTG
Bacillus amyloliquefaciens FZB42 RBAM_007010 -32 5.2 TAGAACATATGTTTGA
Bacillus pumilus SAFR-032 BPUM_0625 -32 5.2 TAGAACATAAGTTCGA
Bacillus licheniformis DSM 13 BLi00715 -33 5.2 TAGAACATATGTTTGA
Anoxybacillus flavithermus WK1 Aflv_0246 -13 4.5 GAGAACATATGTTTTG
Geobacillus kaustophilus HTA426 GK0275 -31 4.8 TAGAACATATGTTTTG
Bacillus halodurans C-125 BH0648 -8 4.6 AAGAACAAGTGTTTGG
Position: -41
Score: 5
Sequence: ACGAACAAACGTTCTA
Locus tag: B14911_20738
B14911_20738 -41 5 ACGAACAAACGTTCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yhjD
Ortholog function: Hypothetical protein
Bacillus pumilus SAFR-032 BPUM_0989 -34 4.5 AAGAACGTGTGTTCTA
Bacillus licheniformis DSM 13 BLi01120 -45 4.6 CAGAACAAATGTTCCT
Bacillus halodurans C-125 BH2963 -40 4.5 ACGAACACATGTTCCT
Oceanobacillus iheyensis HTE831 OB1178 -34 4.5 ACGAACATATGATCTG
Position: -260
Score: 4.6
Sequence: ACGAATATCCGTTCGC
Locus tag: B14911_04814
B14911_04814 -260 4.6 ACGAATATCCGTTCGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: uvrB
Ortholog function: Excinuclease ABC subunit B
Bacillus subtilis subsp. subtilis str. 168 BSU35170 -93 4.9 CCGAACTTTAGTTCGT
Bacillus amyloliquefaciens FZB42 RBAM_032310 -90 5 TCGAACTTTAGTTCGT
Bacillus pumilus SAFR-032 BPUM_3148 -82 4.9 CCGAACTTTAGTTCGT
Bacillus licheniformis DSM 13 BLi03759 -81 4.9 CCGAACTTTAGTTCGT
Anoxybacillus flavithermus WK1 Aflv_2547 -81 5.1 TAGAATATTTGTTCGT
Geobacillus kaustophilus HTA426 GK3086 -85 4.8 ACGAATATGAGTTCGC
Bacillus cereus ATCC 14579 BC5168 -86 4.9 CCGAATATCTGTTCGT
Bacillus halodurans C-125 BH3595 -91 4.9 CAAAACAAACGTTCGT
Bacillus clausii KSM-K16 ABC3059 -337 4.4 TAGTACGTATGTTCGT
Oceanobacillus iheyensis HTE831 OB2488 -70 4.7 ACGAATACTTGTTCGT
Position: -74
Score: 5.2
Sequence: AAGAACATTTGTTCGC
Locus tag: B14911_21578
B14911_21578 -74 5.2 AAGAACATTTGTTCGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: BH1502
Ortholog function: Hypothetical protein
Bacillus licheniformis DSM 13 BLi00182 -41 5.4 AAGAACAAATGTTCGT
Bacillus halodurans C-125 BH1502 -71 4.8 ACGAACGTACGTTCTT
-51 4.8 TCGAATGTACGTTCGT
Position: -141
Score: 5.2
Sequence: AAGAATATATGTTCGC
Position: -74
Score: 5.2
Sequence: TCGAACTTATGTTTGT
Locus tag: B14911_09217
B14911_09217 -141 5.2 AAGAATATATGTTCGC
-74 5.2 TCGAACTTATGTTTGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: lexA
Ortholog function: SOS-response transcriptional repressor
Bacillus subtilis subsp. subtilis str. 168 BSU17850 -139 4.2 AGGAATGTTTGTTCGC
-102 4.4 ACGAACAAACGTTTCT
-73 5.1 TCGAACCTATGTTTGT
Bacillus amyloliquefaciens FZB42 RBAM_017650 -140 4.5 AAGAATGTTTGTTCGC
-103 4.4 ACGAACAAACGTTTCT
-73 5.1 TCGAACCTATGTTTGT
Bacillus pumilus SAFR-032 BPUM_1686 -142 4.6 TAGAATGTGTGTTCGT
-103 4.4 ACGAACAAACGTTTCT
-73 5.1 TCGAACCTATGTTTGT
Bacillus licheniformis DSM 13 BLi02032 -346 4.1 ATGAATTTGTGTTTGT
-141 4.2 CAGAATGTTTGTTCGG
-103 4.6 ACGAACAAATGTTTCT
-73 5.1 TCGAACCTATGTTTGT
Anoxybacillus flavithermus WK1 Aflv_1506 -110 5.2 TAGAACATTTGTTTGT
-82 4.8 GAGAACTTTTGTTCGT
-53 5.2 TCGAACTTATGTTTGT
Geobacillus kaustophilus HTA426 GK1328 -136 4.5 TAGAATGTTTGTTCGC
-103 4.9 AGGAACATTTGTTTGT
-74 5.1 TCGAACCTATGTTTGT
Bacillus cereus ATCC 14579 BC3690 -70 5.2 TCGAACTTATGTTTGT
Bacillus halodurans C-125 BH2356 -107 4.7 AAGAACACTTGTTTGT
-78 4.9 TAGAACTTATGTTTGC
Bacillus clausii KSM-K16 ABC2167 -107 4.6 AGGAACAACTGTTCGT
-76 4.9 TAGAACTTATGTTTGC
Oceanobacillus iheyensis HTE831 OB1669 -142 4.8 CAGAACAATTGTTCTT
-107 4.6 CCGAACATATGATCTT
-78 4.2 TAGAACGAGTGTTTGC
Paenibacillus sp. JDR-2 Pjdr2_2621 -157 4.4 CCGAACGTTTGTTCTG
-118 5.1 ACGAACAAATGTTTGC
-72 5.1 AAGAACTTATGTTTGT
Position: -133
Score: 4.6
Sequence: TAGAACACTTGTTCTT
Locus tag: B14911_06833
B14911_06833 -133 4.6 TAGAACACTTGTTCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: parE
Ortholog function: Topoisomerase IV subunit B (EC 5.99.1.-)
Bacillus subtilis subsp. subtilis str. 168 BSU18090 -220 4.9 ACAAACATACGTTCTC
Bacillus amyloliquefaciens FZB42 RBAM_017900 -243 4.3 GCGAACTCATGTTCTT
Bacillus pumilus SAFR-032 BPUM_1709 -246 4.8 TAGAACATTTGTTCTG
Anoxybacillus flavithermus WK1 Aflv_1444 -30 4.7 AGAAACAAATGTTCTT
Geobacillus kaustophilus HTA426 GK1751 -40 4.1 AGAAACAGGTGTTCTT
Bacillus cereus ATCC 14579 BC3597 -44 4.6 AGAAACATATGTTCTG
Bacillus halodurans C-125 BH2140 -72 4.9 CCGAACATGCGTTTGT
Bacillus clausii KSM-K16 ABC1989 -64 4.5 CAGAACAAACATTCGT
Oceanobacillus iheyensis HTE831 OB1693 -57 4.6 AAGAACAGTTGTTCTA
Paenibacillus sp. JDR-2 Pjdr2_2492 -172 4 GCGAATTTATGTTATT
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