Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of AraR regulog to Bacillus coagulans 36D1

Reference regulog properties
Source regulog: AraR - Bacillales
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Arabinose utilization
Effector: Arabinose
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus coagulans 36D1
Orthologous TF(s) BcoaDRAFT_1002, BcoaDRAFT_0996
Regulated genes 4
Built upon 43 sites [see more]
Predicted regulatory interactions in Bacillus coagulans 36D1
Locus tag Position Score Sequence
Position: -235
Score: 6
Sequence: AAATTTGTACGAACAAATAA
Locus tag: BcoaDRAFT_0996
BcoaDRAFT_0996 -235 6 AAATTTGTACGAACAAATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: araR
Ortholog function: Transcriptional repressor of arabinoside utilization, GntR family
Bacillus subtilis subsp. subtilis str. 168 BSU33970 -91 5.5 TCAATTGTACGTACTTATAT
-48 6 TAATTAGTACGTACAAATAT
Bacillus amyloliquefaciens FZB42 RBAM_031330 -167 5.6 ACATTTGTACGTACTTATGA
-124 5.4 AAATTAGTACGCACAAATAA
Bacillus pumilus SAFR-032 BPUM_2330 -191 6.1 ATATTTGTACGTACATATGT
Bacillus licheniformis DSM 13 BLi02061 -192 5.8 TTTTTTGTACGTACATATGT
-160 5 TAATATGTTCATATAAATAT
Anoxybacillus flavithermus WK1 Aflv_0528 -81 5.9 AAATATATACGTACAAATAA
Geobacillus kaustophilus HTA426 GK1907 -75 5 ATAATGATACGGACAAATAA
Bacillus halodurans C-125 BH1875 -36 5.2 TCATTTGTACGTATAAGTTG
Oceanobacillus iheyensis HTE831 OB2800 -203 5.4 ATTATTGTACGTACATTTGT
-170 5.9 ATATATATACGTACAAATTA
-63 5.3 AAATATGTACATACAAGTAT
Paenibacillus sp. JDR-2 Pjdr2_4208 -100 4.8 TCACATGTACATACAAGTTA
Position: -200
Score: 6
Sequence: TTATTTGTTCGTACAAATTT
Locus tag: BcoaDRAFT_0997
BcoaDRAFT_0997 -200 6 TTATTTGTTCGTACAAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: araF
Ortholog function: L-arabinose-binding periplasmic protein precursor AraF (TC 3.A.1.2.2)
Geobacillus kaustophilus HTA426 GK1910 -36 5.7 TTAAATATACGTACAAATTT
Position: -3
Score: 5.4
Sequence: ATAATGATACGTACAAATAT
Locus tag: BcoaDRAFT_1002
BcoaDRAFT_1002 -3 5.4 ATAATGATACGTACAAATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: araR
Ortholog function: Transcriptional repressor of arabinoside utilization, GntR family
Bacillus subtilis subsp. subtilis str. 168 BSU33970 -91 5.5 TCAATTGTACGTACTTATAT
-48 6 TAATTAGTACGTACAAATAT
Bacillus amyloliquefaciens FZB42 RBAM_031330 -167 5.6 ACATTTGTACGTACTTATGA
-124 5.4 AAATTAGTACGCACAAATAA
Bacillus pumilus SAFR-032 BPUM_2330 -191 6.1 ATATTTGTACGTACATATGT
Bacillus licheniformis DSM 13 BLi02061 -192 5.8 TTTTTTGTACGTACATATGT
-160 5 TAATATGTTCATATAAATAT
Anoxybacillus flavithermus WK1 Aflv_0528 -81 5.9 AAATATATACGTACAAATAA
Geobacillus kaustophilus HTA426 GK1907 -75 5 ATAATGATACGGACAAATAA
Bacillus halodurans C-125 BH1875 -36 5.2 TCATTTGTACGTATAAGTTG
Oceanobacillus iheyensis HTE831 OB2800 -203 5.4 ATTATTGTACGTACATTTGT
-170 5.9 ATATATATACGTACAAATTA
-63 5.3 AAATATGTACATACAAGTAT
Paenibacillus sp. JDR-2 Pjdr2_4208 -100 4.8 TCACATGTACATACAAGTTA
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