Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of GalR regulog to Pediococcus pentosaceus ATCC 25745

Reference regulog properties
Source regulog: GalR - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Galactosides utilization; Galactose utilization
Effector: Galactose
Phylum: Firmicutes
Propagated regulon:
Target genome Pediococcus pentosaceus ATCC 25745
Orthologous TF(s) PEPE_0201
Regulated genes 5
Built upon 30 sites [see more]
Predicted regulatory interactions in Pediococcus pentosaceus ATCC 25745
Locus tag Position Score Sequence
Position: -177
Score: 5.2
Sequence: CAAAATTTTGTAAAAATAT
Locus tag: PEPE_0201
PEPE_0201 -177 5.2 CAAAATTTTGTAAAAATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: galR
Ortholog function: Galactose utilization transcriptional regulator GalR, LacI family
Pediococcus pentosaceus ATCC 25745 PEPE_0201 -177 5.2 CAAAATTTTGTAAAAATAT
Position: -89
Score: 5.4
Sequence: TTATTTTAACTAAAATATT
Locus tag: PEPE_0202
PEPE_0202 -89 5.4 TTATTTTAACTAAAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: galM
Ortholog function: Aldose 1-epimerase (EC 5.1.3.3)
Lactobacillus brevis ATCC 367 LVIS_1908 -84 5.3 CGAATTTTAGTAAAAAATT
Oenococcus oeni PSU-1 OEOE_0301 -231 5.5 AATATTTTAGTAAAGATTT
Pediococcus pentosaceus ATCC 25745 PEPE_0202 -89 5.4 TTATTTTAACTAAAATATT
Position: -85
Score: 5.6
Sequence: CAAATTTTACTAAAAAACA
Locus tag: PEPE_0203
PEPE_0203 -85 5.6 CAAATTTTACTAAAAAACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: lacS2
Ortholog function: Lactose and galactose permease, GPH translocator family
Lactobacillus plantarum WCFS1 lp_3486 -88 5.7 CAAATTTTACTAAAAATCA
Pediococcus pentosaceus ATCC 25745 PEPE_0203 -108 5.1 ACTAATTTACTAAAATAAT
-85 5.6 CAAATTTTACTAAAAAACA
Position: -266
Score: 6.2
Sequence: ATAATTTTACTAAAATTTT
Position: -106
Score: 4.8
Sequence: TTAATTTTGGTTAAATTTT
Position: -94
Score: 5.1
Sequence: AAATTTTAACTAAAACAAC
Locus tag: PEPE_0205
PEPE_0205 -266 6.2 ATAATTTTACTAAAATTTT
-106 4.8 TTAATTTTGGTTAAATTTT
-94 5.1 AAATTTTAACTAAAACAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: lacL
Ortholog function: Beta-galactosidase large subunit (EC 3.2.1.23)
Lactobacillus fermentum IFO 3956 LAF_0247 -91 5.5 TAATATTTACTAAACTTTT
Lactobacillus plantarum WCFS1 lp_3483 -266 5.9 ATAGTTTTACTAAAATTTT
Lactobacillus reuteri JCM 1112 LAR_0276 -95 4.9 AAAATTTACGTAAATTTTA
Lactobacillus salivarius subsp. salivarius UCC118 LSL_0376 -86 5.5 AATATTTTAGTAAAAAGTA
Pediococcus pentosaceus ATCC 25745 PEPE_0205 -266 6.2 ATAATTTTACTAAAATTTT
-94 5.1 AAATTTTAACTAAAACAAC
Position: -193
Score: 5.2
Sequence: AAAATTTAACCAAAATTAA
Position: -33
Score: 6.3
Sequence: AAAATTTTAGTAAAATTAT
Locus tag: PEPE_0206
PEPE_0206 -193 5.2 AAAATTTAACCAAAATTAA
-33 6.3 AAAATTTTAGTAAAATTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: galK
Ortholog function: Galactokinase (EC 2.7.1.6)
Lactobacillus brevis ATCC 367 LVIS_1904 -38 5.9 AAAACTTTACTAAAAATTT
Lactobacillus plantarum WCFS1 lp_3482 -36 6 AAAATTTTAGTAAAACTAT
Lactobacillus reuteri JCM 1112 LAR_1662 -53 4.9 TTGTATTTAGTAAAAGTTT
Oenococcus oeni PSU-1 OEOE_0304 -231 5.5 AATATTTTAGTAAAGATTT
Pediococcus pentosaceus ATCC 25745 PEPE_0206 -193 5.2 AAAATTTAACCAAAATTAA
-33 6.3 AAAATTTTAGTAAAATTAT
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