Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of CcpA regulog to Leuconostoc citreum KM20

Reference regulog properties
Source regulog: CcpA - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode:
Biological process: Carbon catabolism
Effector: HPr, phosphocarrier protein; Fructose-1,6-bisphosphate
Phylum: Firmicutes
Propagated regulon:
Target genome Leuconostoc citreum KM20
Orthologous TF(s) LCK_00457
Regulated genes 28
Built upon 561 sites [see more]
Predicted regulatory interactions in Leuconostoc citreum KM20
Locus tag Position Score Sequence
Position: -186
Score: 4.7
Sequence: GTGAAAACGCTTCCAT
Locus tag: LCK_p200026
LCK_p200026 -186 4.7 GTGAAAACGCTTCCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: malT
Ortholog function: Predicted maltose/maltodextrin permease
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0994 -140 4.6 ATATAAACGGTTACAT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0893 -41 5 ATGTAAACGGTTACAA
Position: -98
Score: 5
Sequence: ATGAAAGCGTATACAA
Locus tag: LCK_00075
LCK_00075 -98 5 ATGAAAGCGTATACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: xylA
Ortholog function: Xylose isomerase (EC 5.3.1.5)
Lactobacillus brevis ATCC 367 LVIS_0183 -91 3.9 GCGAAAACGCTTGCAT
Lactobacillus fermentum IFO 3956 LAF_0402 -217 4.3 TGGGAAGCGGTTTCTA
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0130 -83 5 ATGAAAGCGTATACAA
Pediococcus pentosaceus ATCC 25745 PEPE_0187 -150 4.2 TTGTAAGCGAATACAC
-129 4.4 ATGTCAACGCTTTTAT
-107 4.7 TTGAAAACGCTTTACA
Position: -42
Score: 5
Sequence: AAGAAAACGCTTACAA
Locus tag: LCK_00126
LCK_00126 -42 5 AAGAAAACGCTTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: bglA
Ortholog function: 6-phospho-beta-glucosidase (EC 3.2.1.86)
Lactobacillus acidophilus NCFM LBA0874 -44 4.9 ATGCAAACGTTTTCAA
Lactobacillus johnsonii NCC 533 LJ0182 -132 4.8 ATGAAACCGTTTGCAA
-35 4.3 TCGAAAACGCTTACTT
Lactobacillus plantarum WCFS1 lp_2777 -68 4.7 ATGAAAGCGGTTTATT
Oenococcus oeni PSU-1 OEOE_0341 -70 4.8 ATGAAAGCGTTTTAAG
Pediococcus pentosaceus ATCC 25745 PEPE_0106 -51 4.5 ATGAAAAGGCTTTCTA
Position: -75
Score: 4.6
Sequence: TTGTAAGCGCTTAACA
Locus tag: LCK_00259
LCK_00259 -75 4.6 TTGTAAGCGCTTAACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: pgi
Ortholog function: Glucose-6-phosphate isomerase (EC 5.3.1.9)
Lactobacillus acidophilus NCFM LBA0752 -90 4.3 GTGAATGCGCTTATAA
Lactobacillus casei ATCC 334 LSEI_1126 -62 4 ATGAAACCACTCTCAT
Lactobacillus fermentum IFO 3956 LAF_1686 -63 4.4 GAGTTAGCGCTTTCAT
Lactobacillus fermentum IFO 3956 LAF_0411 -66 4.2 ATGGAAACGTTATCGT
Lactobacillus helveticus DPC 4571 lhv_0795 -14 4 TAGGAAGCGGATTTAT
Lactobacillus plantarum WCFS1 lp_2502 -77 3.8 GAGGAAGCGCTTTTCA
Lactobacillus reuteri JCM 1112 LAR_0415 -69 4.4 TTGAAACCGACTTCAT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0355 -37 5 TTGTAACCGATTTCAT
Oenococcus oeni PSU-1 OEOE_0636 -118 3.9 TTGGAAGCTATTCCAA
Position: -43
Score: 4.5
Sequence: ATGTAAGCGCTTAACA
Locus tag: LCK_00356
LCK_00356 -43 4.5 ATGTAAGCGCTTAACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: scrP
Ortholog function: Sucrose phosphorylase (EC 2.4.1.7)
Lactobacillus reuteri JCM 1112 LAR_1452 -190 4 AAAATAGCGTTATCAT
-133 4 ATGTAATGGATTACAA
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0384 -137 4.1 ATGATAATGTTTTCAT
-54 4.4 GTGGAACCGGTTACAA
Position: -31
Score: 5.1
Sequence: ATGGAAGCGCTTACAA
Locus tag: LCK_00423
LCK_00423 -31 5.1 ATGGAAGCGCTTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: lplA1
Ortholog function: Lipoate-protein ligase A
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0736 -31 4.9 GTGTAAGCGGTTACAA
Oenococcus oeni PSU-1 OEOE_0327 -53 5.1 TTGAAAGCGCTTACAG
Pediococcus pentosaceus ATCC 25745 PEPE_1774 -107 4 TTTAAAACATTTTAAA
-40 4.8 TAGAAAGCGCTTCCAT
Position: -126
Score: 4.9
Sequence: TTGCAAACGCTTACAA
Locus tag: LCK_00456
LCK_00456 -126 4.9 TTGCAAACGCTTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: pepQ
Ortholog function: Xaa-Pro dipeptidase (EC 3.4.13.9)
Lactobacillus acidophilus NCFM LBA0430 -85 4.6 TTGCAAACGTTTACAG
Lactobacillus brevis ATCC 367 LVIS_1204 -103 4.9 TTGAAAACGTTTTCGA
Lactobacillus casei ATCC 334 LSEI_0808 -229 4.2 ATGCAAGCGTTTTACT
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 LBUL_1474 -89 4 GTGCAATCGCTTACAG
Lactobacillus helveticus DPC 4571 lhv_0456 -86 4.6 GTGCAAACGTTTACAT
Lactobacillus johnsonii NCC 533 LJ0490 -85 4.2 TTGCAACCGTTTACGA
Lactobacillus plantarum WCFS1 lp_2258 -158 5.2 TTGAAATCGCTTTCAT
Lactobacillus sakei subsp. sakei 23K LSA0414 -120 4.1 ATGCAAGCGGTTTACA
Lactobacillus salivarius subsp. salivarius UCC118 LSL_0419 -125 4 TTGCAAGCGTTTCATA
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0543 -124 4.9 TTGCAAACGCTTACAA
-102 4.2 TTATAAGTGTTTTCAT
Pediococcus pentosaceus ATCC 25745 PEPE_1251 -109 4.6 ATGAATACGTTATCAA
Position: -102
Score: 4.9
Sequence: TTGTAAGCGTTTGCAA
Locus tag: LCK_00457
LCK_00457 -102 4.9 TTGTAAGCGTTTGCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ccpA
Ortholog function: Carbon catabolism global transcriptional regulator CcpA, LacI family
Lactobacillus acidophilus NCFM LBA0431 -75 4.4 CTGTAAACGTTTGCAA
Lactobacillus brevis ATCC 367 LVIS_1203 -107 4.7 TCGAAAACGTTTTCAA
-49 4.1 TTGAAAACGGATGAAA
Lactobacillus casei ATCC 334 LSEI_0809 -94 4 AGTAAAACGCTTGCAT
Lactobacillus helveticus DPC 4571 lhv_0457 -76 4.3 ATGTAAACGTTTGCAC
Lactobacillus johnsonii NCC 533 LJ0491 -74 4 TCGTAAACGGTTGCAA
Lactobacillus plantarum WCFS1 lp_2256 -121 5.2 ATGAAAGCGATTTCAA
-51 4 ATGAAAACGGATGAAA
Lactobacillus rhamnosus GG LGG_00793 -95 4 AGTAAAACGCTTGCAT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0544 -114 4.4 ATGAAAACACTTATAA
-92 4.9 TTGTAAGCGTTTGCAA
Oenococcus oeni PSU-1 OEOE_0684 -59 4.6 ATGTAATCGCTTGCAT
Pediococcus pentosaceus ATCC 25745 PEPE_1250 -69 4.6 TTGATAACGTATTCAT
Position: -65
Score: 5.1
Sequence: ATGGAAGCGCTTACAT
Locus tag: LCK_00733
LCK_00733 -65 5.1 ATGGAAGCGCTTACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fmpA
Ortholog function: Predicted mannose specific PTS system, IIA component
Lactobacillus casei ATCC 334 LSEI_0559 -200 4.5 TTGTAAGCGTTAACCT
Lactobacillus johnsonii NCC 533 LJ1656 -82 4.2 CAGTAAACGATTACAT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_1273 -85 5 ATGCAAGCGCTTACAT
Oenococcus oeni PSU-1 OEOE_1204 -186 4.6 ATGAATTCGTTTTCAA
Position: -146
Score: 4.9
Sequence: ATGTAAGCGCTTGCAT
Locus tag: LCK_00798
LCK_00798 -146 4.9 ATGTAAGCGCTTGCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nplT
Ortholog function: Neopullulanase (EC 3.2.1.135)
Lactobacillus fermentum IFO 3956 LAF_0739 -96 4.6 GTGAAAACGGTTACTT
Lactobacillus plantarum WCFS1 lp_3627 -73 4.5 ATGTAAGGGGTTACAT
Lactobacillus reuteri JCM 1112 LAR_0078 -130 4.9 ATGTAATCGTTTACAT
Position: -28
Score: 5.3
Sequence: TTGAAAGCGGTTACAA
Locus tag: LCK_00810
LCK_00810 -28 5.3 TTGAAAGCGGTTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: galK
Ortholog function: Galactokinase (EC 2.7.1.6)
Lactobacillus acidophilus NCFM LBA1459 -36 4.3 CTGAAAACGATTACAG
Lactobacillus brevis ATCC 367 LVIS_1904 -98 4.7 ATGAAAACGTTTTATA
Lactobacillus fermentum IFO 3956 LAF_1792 -99 4.1 ATGTAAGCGCTCTATT
Lactobacillus helveticus DPC 4571 lhv_1501 -37 4.8 TTGAAAACGATTACAG
Lactobacillus johnsonii NCC 533 LJ0859 -36 5.1 ATGAAAACGATTACAA
Lactobacillus reuteri JCM 1112 LAR_1662 -125 4.5 GTGTAATCGTTTTCTT
-93 4.4 TTGTAAGCGCTTATTG
Position: -56
Score: 5.3
Sequence: ATGTAAGCGCTTACAA
Locus tag: LCK_00936
LCK_00936 -56 5.3 ATGTAAGCGCTTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: bglA
Ortholog function: 6-phospho-beta-glucosidase (EC 3.2.1.86)
Lactobacillus acidophilus NCFM LBA0874 -44 4.9 ATGCAAACGTTTTCAA
Lactobacillus johnsonii NCC 533 LJ0182 -132 4.8 ATGAAACCGTTTGCAA
-35 4.3 TCGAAAACGCTTACTT
Lactobacillus plantarum WCFS1 lp_2777 -68 4.7 ATGAAAGCGGTTTATT
Oenococcus oeni PSU-1 OEOE_0341 -70 4.8 ATGAAAGCGTTTTAAG
Pediococcus pentosaceus ATCC 25745 PEPE_0106 -51 4.5 ATGAAAAGGCTTTCTA
Position: -206
Score: 4.5
Sequence: ATGTTAGCGCTTCCAA
Locus tag: LCK_00963
LCK_00963 -206 4.5 ATGTTAGCGCTTCCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glclP
Ortholog function: Beta-glucosides PTS, EIIBCA (EC 2.7.1.69)
Lactobacillus plantarum WCFS1 lp_3133 -137 4.6 ATGTAAAGGCTTACAT
Position: -87
Score: 5.1
Sequence: ATGTAAGCGGTTACAA
Locus tag: LCK_01121
LCK_01121 -87 5.1 ATGTAAGCGGTTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: scrA
Ortholog function: Sucrose-specific PTS system, IIABC component (EC 2.7.1.69)
Lactobacillus acidophilus NCFM LBA0401 -219 4.7 ATGTAAGCGTTATCTT
-30 4.9 ATAAAAGCGTTTACAT
Lactobacillus fermentum IFO 3956 LAF_1578 -126 4.4 TTGGCAGCGATTTCAA
-57 4.5 AGAAAAGCGCTTACAA
Lactobacillus johnsonii NCC 533 LJ0519 -214 4.6 ATGTAAACGCATTCTT
-37 4.4 TTTAAAACGCTTACAC
Lactobacillus plantarum WCFS1 lp_0185 -212 4.3 ATAAAACCGCTTACAC
-157 4 ATGTCAGCGTTTCAAA
-58 4.1 TGTAAAGCGCTTGCAT
Lactobacillus sakei subsp. sakei 23K LSA1792 -183 4.2 ATGTAAACGTTTGATA
-54 4.5 TGAAAAGCGTTTACAA
Lactobacillus salivarius subsp. salivarius UCC118 LSL_0066 -52 4.2 CATTAAGCGTTTTCAA
Pediococcus pentosaceus ATCC 25745 PEPE_0518 -212 4.3 ATAAAACCGCTTACAC
-157 4 ATGTCAGCGTTTCAAA
-58 4.1 TGTAAAGCGCTTGCAT
Position: -42
Score: 4.5
Sequence: TGGTTAGCGTTTTCAA
Locus tag: LCK_01183
LCK_01183 -42 4.5 TGGTTAGCGTTTTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: araB
Ortholog function: Ribulokinase (EC 2.7.1.16)
Lactobacillus brevis ATCC 367 LVIS_1742 -79 4.4 TTGAAAGGGCTTTCGA
Lactobacillus fermentum IFO 3956 LAF_1558 -111 4.6 ATGAAAACGGTTTATT
Lactobacillus plantarum WCFS1 lp_3556 -63 4.6 TTGAAAGGGCTTTCTA
Lactobacillus reuteri JCM 1112 LAR_0468 -63 4.7 ATGAAAGCGCGTTCAT
Lactobacillus sakei subsp. sakei 23K LSA1859 -78 4.7 TTGAAACCGTTTTATA
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0854 -104 5 TTGTAAGCGTTTCCAA
Oenococcus oeni PSU-1 OEOE_0227 -218 4.3 ATTTAAACGGTTTTAT
-116 4.4 GTGTAAGCACTTACAA
Pediococcus pentosaceus ATCC 25745 PEPE_0163 -48 4.9 ATGAATACGCTTTCAA
Position: -96
Score: 4.9
Sequence: CTGTAAGCGTTTTCAT
Locus tag: LCK_01185
LCK_01185 -96 4.9 CTGTAAGCGTTTTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: araA
Ortholog function: L-arabinose isomerase (EC 5.3.1.4)
Lactobacillus brevis ATCC 367 LVIS_1740 -79 4.4 TTGAAAGGGCTTTCGA
Lactobacillus fermentum IFO 3956 LAF_1554 -100 4.3 TGGTAAGCGTTTTATA
-76 4.4 GTGAAATCGCTTACAG
Lactobacillus plantarum WCFS1 lp_3554 -63 4.6 TTGAAAGGGCTTTCTA
Lactobacillus reuteri JCM 1112 LAR_0470 -63 4.7 ATGAAAGCGCGTTCAT
Lactobacillus sakei subsp. sakei 23K LSA1856 -78 4.7 TTGAAACCGTTTTATA
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0852 -104 5 TTGTAAGCGTTTCCAA
Pediococcus pentosaceus ATCC 25745 PEPE_0165 -48 4.9 ATGAATACGCTTTCAA
Position: -31
Score: 5.1
Sequence: AAGAAAGCGCTTACAA
Locus tag: LCK_01220
LCK_01220 -31 5.1 AAGAAAGCGCTTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fruR
Ortholog function: Fructose utilization transcriptional regulator FruR, DeoR family
Lactobacillus acidophilus NCFM LBA1779 -37 4.2 GAGAAAGCGAATACAA
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 LBUL_1889 -164 4 GAGAAAGCCTTTACAA
Lactobacillus helveticus DPC 4571 lhv_1846 12 4.3 GAGAAAGCGGATACAA
Lactobacillus johnsonii NCC 533 LJ0570 -40 4.1 CTGAAAGCGTTTATCA
Lactobacillus plantarum WCFS1 lp_2095 -6 4.3 TTGAAAGTGCTTACAG
Lactobacillus sakei subsp. sakei 23K LSA1048 -130 4 ATGAAAACCTTTACAC
-40 4.3 TTGTAAACGATGACAT
Pediococcus pentosaceus ATCC 25745 PEPE_1166 -6 4.3 ATGAAAGTGCTTACAG
Position: -97
Score: 4.5
Sequence: GTGCAAGCGGTTACAA
Locus tag: LCK_01249
LCK_01249 -97 4.5 GTGCAAGCGGTTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: scrT
Ortholog function: Predicted sucrose permease
Lactobacillus reuteri JCM 1112 LAR_1453 -190 4 AAAATAGCGTTATCAT
-133 4 ATGTAATGGATTACAA
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0383 -137 4.1 ATGATAATGTTTTCAT
-54 4.4 GTGGAACCGGTTACAA
Position: -59
Score: 5.2
Sequence: TTGTAAGCGGTTACAT
Locus tag: LCK_01412
LCK_01412 -59 5.2 TTGTAAGCGGTTACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: treR
Ortholog function: Trehalose utilization transcriptional regulator TreR, GntR family
Lactobacillus acidophilus NCFM LBA1013 -169 4.7 TATAAAGCGTTTTCAT
-102 4.5 TTGAAAGCGATCACAA
Lactobacillus casei ATCC 334 LSEI_0629 -90 4.2 TTAAAAGCGTTTAAAC
-27 4.3 GTGAAAGCGATTTCTG
Lactobacillus johnsonii NCC 533 LJ0759 4 4.4 AAGTATCCGCTTTCAT
Lactobacillus plantarum WCFS1 lp_0262 -29 4.7 ATGAAAACGATAACAA
Lactobacillus rhamnosus GG LGG_00601 -27 4.3 GTGAAAACGGTTACTG
Lactobacillus sakei subsp. sakei 23K LSA1201 -145 4.2 GTAAAAGCGCTTTCTG
-82 4.4 TTTGAACCGTTTACAA
Lactobacillus salivarius subsp. salivarius UCC118 LSL_1513 -130 4.2 ATGAAATTGTTTACAA
Oenococcus oeni PSU-1 OEOE_1339 -122 4.1 TTGAAAACGAAAACTT
-66 4.5 TGAAAAACGTTTTCAA
Pediococcus pentosaceus ATCC 25745 PEPE_1805 -177 4.7 TTGTAAGCGCTTGCTA
-34 4.6 ATGTAAGCGTTTCTAA
Position: -98
Score: 4.9
Sequence: ATGTAAGCGCTTGCAT
Locus tag: LCK_01430
LCK_01430 -98 4.9 ATGTAAGCGCTTGCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nplT
Ortholog function: Neopullulanase (EC 3.2.1.135)
Lactobacillus fermentum IFO 3956 LAF_0739 -96 4.6 GTGAAAACGGTTACTT
Lactobacillus plantarum WCFS1 lp_3627 -73 4.5 ATGTAAGGGGTTACAT
Lactobacillus reuteri JCM 1112 LAR_0078 -130 4.9 ATGTAATCGTTTACAT
Position: -145
Score: 5.1
Sequence: ATGAAAGCGTTTACTT
Position: -74
Score: 5.1
Sequence: GTGAAAGCGTTTACAT
Locus tag: LCK_01444
LCK_01444 -145 5.1 ATGAAAGCGTTTACTT
-74 5.1 GTGAAAGCGTTTACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: manL
Ortholog function: Mannose-specific PTS system, IIAB component (EC 2.7.1.69)
Lactobacillus acidophilus NCFM LBA0452 -42 4.5 ATAAAAGCGGATTCAT
Lactobacillus fermentum IFO 3956 LAF_0391 -140 4.7 TAGTAAGCGTTTACAG
Lactobacillus helveticus DPC 4571 lhv_0480 -42 4.5 ATAAAAGCGGATTCAT
Lactobacillus johnsonii NCC 533 LJ0503 -106 4.4 ATGCAAGCATTTTCAA
-68 4.1 AAGCAAACGTATACAT
Lactobacillus plantarum WCFS1 lp_0575 1 4 TGGTAAGCATTATCAT
Lactobacillus sakei subsp. sakei 23K LSA0449 -136 4.2 AGTAAAGCGTTTTAAA
-57 4.6 TTGTTAGCGTTTTTAT
Lactobacillus salivarius subsp. salivarius UCC118 LSL_0086 -109 4.3 TAGAAATCGTTTACAC
Lactobacillus salivarius subsp. salivarius UCC118 LSL_0654 -131 4.3 TAGTAAGTGTTTTCAA
-61 4.1 ATGAAAAGGCTTTATT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_1768 -100 4.7 ATGTAAACGGTAACAA
-75 5.4 TTGAAAGCGTTTACAA
Pediococcus pentosaceus ATCC 25745 PEPE_1518 -146 4.5 TTGAAAGCGTTTTTTG
Position: -157
Score: 4.9
Sequence: GTGTAAACGTTTACAT
Position: -63
Score: 4.7
Sequence: TTGTAAGCGCTTTGAT
Locus tag: LCK_01464
LCK_01464 -157 4.9 GTGTAAACGTTTACAT
-63 4.7 TTGTAAGCGCTTTGAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ptsH
Ortholog function: Phosphotransferase system, HPr-related protein
Lactobacillus acidophilus NCFM LBA0639 -111 4.4 ATGTAAACTGTTACAT
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 LBUL_0512 -108 4.7 ATGAAAACATTTACAA
Lactobacillus helveticus DPC 4571 lhv_0686 -109 4.4 ATGTAAGCTATTACAT
Lactobacillus johnsonii NCC 533 LJ0816 -109 4.6 ATGTAAACATTTACAT
Lactobacillus plantarum WCFS1 lp_1273 -135 4 ATGAAAGGGCTTGTAT
Lactobacillus reuteri JCM 1112 LAR_1256 -102 4 TATTTAACGCTTACAA
Lactobacillus salivarius subsp. salivarius UCC118 LSL_0388 -91 4.1 TTGTTATCGTTTGCAT
-68 4.2 ATGTAAACGTGTTCTT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_1780 -157 5.3 ATGTAAACGTTTTCAT
-63 4.7 TTGTAAGCGCTTTGAT
Pediococcus pentosaceus ATCC 25745 PEPE_0609 -127 4 ATGTAAGGGCTTGCTT
Position: -96
Score: 4.9
Sequence: ATGAAAGGGCTTTCAT
Position: -51
Score: 5.3
Sequence: TTGTAAACGCTTACAA
Locus tag: LCK_01483
LCK_01483 -96 4.9 ATGAAAGGGCTTTCAT
-51 5.3 TTGTAAACGCTTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: rbsP
Ortholog function: Predicted ribose permease
Lactobacillus brevis ATCC 367 LVIS_1588 -199 4.3 TTGTAAGCCCTTTAAT
Lactobacillus fermentum IFO 3956 LAF_1736 -158 4.3 TAGCAAACGCTTGCAT
-103 4.5 TTGCAACCGCTTTCCT
Lactobacillus plantarum WCFS1 lp_0498 -30 4.8 AAGAAAGCGCTAACAT
Lactobacillus reuteri JCM 1112 LAR_0401 -135 4.4 TGAAAAGCGATTTCAA
-76 4.5 TTGTAATCACTTTCAA
Oenococcus oeni PSU-1 OEOE_1614 -19 4.9 TTGAAAACACTTTCAA
Position: -67
Score: 4.9
Sequence: TTGAAAGCGTTTACAC
Locus tag: LCK_01537
LCK_01537 -67 4.9 TTGAAAGCGTTTACAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: LVIS_0438
Ortholog function: Hypothetical protein
Lactobacillus brevis ATCC 367 LVIS_0438 -97 4.2 ATGAAAGCGTTTGACA
-75 4.3 AGGAAAACGTTTACCA
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0499 -76 5.1 TTGGAAGCGTTTACAA