Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of TreR regulog to Lactobacillus gasseri ATCC 33323

Reference regulog properties
Source regulog: TreR - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Trehalose utilization
Effector: Trehalose-6-phosphate
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus gasseri ATCC 33323
Orthologous TF(s) LGAS_0534
Regulated genes 1
Built upon 21 sites [see more]
Predicted regulatory interactions in Lactobacillus gasseri ATCC 33323
Locus tag Position Score Sequence
Position: -128
Score: 5.6
Sequence: ACACTTGTTTAGACAAGTAA
Position: -39
Score: 6.1
Sequence: CAACTTGTACAGACAAGTAT
Locus tag: LGAS_0535
LGAS_0535 -128 5.6 ACACTTGTTTAGACAAGTAA
-39 6.1 CAACTTGTACAGACAAGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: treP
Ortholog function: Trehalose-specific PTS system, EIIABC component (EC 2.7.1.69)
Lactobacillus acidophilus NCFM LBA1012 -146 5.4 ATAAATGTATAGACAAGTAA
-68 6.5 CAACTTGTATATACAAGTTT
Lactobacillus casei ATCC 334 LSEI_0631 -61 5.2 ATACCTGTACGTACAGGTAA
Lactobacillus johnsonii NCC 533 LJ0760 -164 5.2 ACACTTGATTAGACAAGTAA
-75 6.1 CAACTTGTACAGACAAGTAT
Lactobacillus plantarum WCFS1 lp_0264 -59 5.6 CAACTTGTCTAAACAAGTCT
Lactobacillus rhamnosus GG LGG_00603 -61 5.6 ATACCTGTACGTACAAGTAG
Lactobacillus sakei subsp. sakei 23K LSA1200 -78 6 CAACTTGTCTATACATGTTG
Lactobacillus salivarius subsp. salivarius UCC118 LSL_1512 -158 4.8 ATAGATGTATATACAATATA
-68 6.3 CAACTTGTATATACAAGTGA
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0507 -40 5.8 TAACTAGTACGTACAAGTTG
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0508 -40 5.8 TAACTAGTACGTACAAGTTG
Oenococcus oeni PSU-1 OEOE_1342 -31 5.5 AAAGTTGTACGTACAAGTGA
Oenococcus oeni PSU-1 OEOE_1341 -31 5.5 AAAGTTGTACGTACAAGTGA
Pediococcus pentosaceus ATCC 25745 PEPE_1804 -171 5.8 TAACTAGTATATACAAGGTA
-95 6.1 CATCTTGTATATACAAGTTT