Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of PerR regulog to Synechococcus elongatus PCC 6301

Reference regulog properties
Source regulog: PerR - Cyanobacteria
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Peroxide stress response
Effector: Manganese ion, (Mn2+)
Phylum: Cyanobacteria
Propagated regulon:
Target genome Synechococcus elongatus PCC 6301
Orthologous TF(s) syc2438_d
Regulated genes 3
Built upon 20 sites [see more]
Predicted regulatory interactions in Synechococcus elongatus PCC 6301
Locus tag Position Score Sequence
Position: -43
Score: 5.2
Sequence: TGAGAATTATTGTAA
Locus tag: syc0002_c
syc0002_c -43 5.2 TGAGAATTATTGTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: isiA
Ortholog function: Iron stress-induced chlorophyll-binding protein
Synechococcus sp. PCC 7002 SYNPCC7002_A1292 -273 4.9 TGAGAATAATTGTAG
Cyanothece sp. PCC 7425 Cyan7425_2434 -95 4.9 TGAGAAAGATTCTGA
Synechococcus elongatus PCC 7942 Synpcc7942_1542 -43 5.2 TGAGAATTATTGTAA
Position: -45
Score: 5.2
Sequence: TAAGACTTATTCTTA
Locus tag: syc2437_c
syc2437_c -45 5.2 TAAGACTTATTCTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: rub
Ortholog function: Predicted rubrerythrin
Synechococcus elongatus PCC 7942 Synpcc7942_1649 -45 5.2 TAAGACTTATTCTTA
Gloeobacter violaceus PCC 7421 glr3734 -62 4.4 ATAGAACGATTCTTA
-45 4.6 TAAGACTTGTTCTAG
Position: -119
Score: 5.1
Sequence: TAAGAATAAGTCTTA
Locus tag: syc2438_d
syc2438_d -119 5.1 TAAGAATAAGTCTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: perR
Ortholog function: Peroxide stress response transcriptional regulator, Fur family
Synechococcus elongatus PCC 7942 Synpcc7942_1648 -119 5.1 TAAGAATAAGTCTTA