Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Rex regulog to Bacillus megaterium QM B1551

Reference regulog properties
Source regulog: Rex - Bacillales
Regulator type: Transcription factor
Regulator family: Rex
Regulation mode: repressor
Biological process: Energy metabolism
Effector: NADH
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus megaterium QM B1551
Orthologous TF(s) BMQ_0261
Regulated genes 4
Built upon 64 sites [see more]
Predicted regulatory interactions in Bacillus megaterium QM B1551
Locus tag Position Score Sequence
Position: -43
Score: 5.5
Sequence: ATTGTGAAAAACATCACAAA
Locus tag: BMQ_0521
BMQ_0521 -43 5.5 ATTGTGAAAAACATCACAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ldh
Ortholog function: L-lactate dehydrogenase (EC 1.1.1.27)
Bacillus subtilis subsp. subtilis str. 168 BSU03050 -85 6 TTTGTGAAGTGTTGCACAAT
-62 6 AATGTGAAATACTTCACAAA
Bacillus amyloliquefaciens FZB42 RBAM_003290 -82 6.3 TTTGTGAAGTATTGCACAAT
-59 5.6 AATGTGAAATACTTCACAAG
Bacillus pumilus SAFR-032 BPUM_0277 -79 6.3 TTTGTGAAGTATTGCACAAT
-56 5.7 AATGTGAAATACTTCACATA
Bacillus licheniformis DSM 13 BLi00366 -82 6 TATGTGAAGTATTGCACAAT
-59 5.8 AATGTGAAGAATTTCACAAA
Anoxybacillus flavithermus WK1 Aflv_0889 -58 5.4 TTTGTGAAACAGTGTACAAT
Geobacillus kaustophilus HTA426 GK0475 -42 5.5 AATGTGAATATATTCACAAA
Bacillus halodurans C-125 BH3937 -276 6.2 AATGTGAAATATTTCACAAA
-219 5.7 CATGTGAAATATTTCACAAA
-44 5.1 CATGTGAAAATATTCACAAA
Bacillus clausii KSM-K16 ABC2872 -68 6.4 TTTGTGAAATAATGCACAAT
-45 5.9 AATGTGAATAATTTCACAAA
Oceanobacillus iheyensis HTE831 OB3279 -68 6.5 TTTGTGAAATATTTCACAAT
Position: -77
Score: 6.2
Sequence: TTTGTGAAACATTTCACAAT
Position: -56
Score: 5.8
Sequence: TATGTGAATAAATTCACAAT
Locus tag: BMQ_2233
BMQ_2233 -77 6.2 TTTGTGAAACATTTCACAAT
-56 5.8 TATGTGAATAAATTCACAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: noxE
Ortholog function: NADH oxidase (EC 1.6.99.3)
Paenibacillus sp. JDR-2 Pjdr2_2160 -273 4.8 TATGTGAAATTAATCACAAC
-207 5.8 ATTGTGAATTAATTCACACA
-42 4.8 TATGTGAATAATTTCACAGG
Position: -97
Score: 5.3
Sequence: TATGTGCAAGATTTCACAAC
Locus tag: BMQ_2630
BMQ_2630 -97 5.3 TATGTGCAAGATTTCACAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yjlC
Ortholog function: Hypothetical protein
Bacillus subtilis subsp. subtilis str. 168 BSU12280 -113 6 ATTGTGCATGAATTCACAAT
Bacillus amyloliquefaciens FZB42 RBAM_012360 -110 6 ATTGTGCATGAATTCACAAT
Bacillus licheniformis DSM 13 BLi02135 -80 6 TTTGTGCATAAATTCACAAA
Bacillus cereus ATCC 14579 BC5060 -82 4.8 TTTGTGAAACTTTGTATAAA
Paenibacillus sp. JDR-2 Pjdr2_6270 -97 5.4 ATTGTGAATAATTTCACTTT
Position: -166
Score: 4.8
Sequence: AACGTGAAGTGATTCACATT
Locus tag: BMQ_4965
BMQ_4965 -166 4.8 AACGTGAAGTGATTCACATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ndh2
Ortholog function: NADH dehydrogenase (EC 1.6.99.3)
Bacillus licheniformis DSM 13 BLi03392 -119 4.9 AAAGTGAAGGGTTTCACAAA
Anoxybacillus flavithermus WK1 Aflv_2402 -76 5.5 TTCGTGAATAAATTCACAAA
Geobacillus kaustophilus HTA426 GK2953 -102 5.6 AACGTGAATTATTTCACAAA
Bacillus clausii KSM-K16 ABC2924 -55 4.8 AAAGTGAAATGAATCACAAA
Paenibacillus sp. JDR-2 Pjdr2_4834 -64 5.7 ATTGTGTAATTTTTCACAAA
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