Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of PsrA regulog to Burkholderia sp. H160

Reference regulog properties
Source regulog: PsrA - Ralstonia
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Fatty acid degradation
Effector: Oleate
Phylum: Proteobacteria/beta
Propagated regulon:
Target genome Burkholderia sp. H160
Orthologous TF(s) BH160DRAFT_0752
Regulated genes 1
Built upon 9 sites [see more]
Predicted regulatory interactions in Burkholderia sp. H160
Locus tag Position Score Sequence
Position: -187
Score: 4
Sequence: TTCGGAACGGCCTTTTTTCT
Position: -77
Score: 5
Sequence: AAAAGAACGGTTGTTTCAAA
Position: -64
Score: 3.8
Sequence: TTTCAAATACCGATTTGAAT
Position: -51
Score: 3.7
Sequence: TTTGAATCGCTTGTTTGCGA
Locus tag: BH160DRAFT_0752
BH160DRAFT_0752 -187 4 TTCGGAACGGCCTTTTTTCT
-77 5 AAAAGAACGGTTGTTTCAAA
-64 3.8 TTTCAAATACCGATTTGAAT
-51 3.7 TTTGAATCGCTTGTTTGCGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: psrA
Ortholog function: Transcriptional regulator for fatty acid degradation PsrA, TetR family
Ralstonia solanacearum GMI1000 RS04928 -122 4.6 TTTAAAACATCCGTTCCTAA
Ralstonia pickettii 12J Rpic_0418 -121 4.5 TTTCAAACGTCTGTTCCTAA
Ralstonia eutropha JMP134 Reut_A3446 -120 3.6 ATTAGAGCAGGCATTCGAAT
Ralstonia eutropha H16 H16_A3736 -104 4 CTTCGTACAGCTGTTTCAAG
Cupriavidus taiwanensis RALTA_A3194 -105 4 CTTCGTACAGCTGTTTCAAG
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