Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of FadP regulog to Burkholderia sp. H160

Reference regulog properties
Source regulog: FadP - Ralstonia
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode:
Biological process: Fatty acid degradation
Effector:
Phylum: Proteobacteria/beta
Propagated regulon:
Target genome Burkholderia sp. H160
Orthologous TF(s) BH160DRAFT_4125
Regulated genes 6
Built upon 85 sites [see more]
Predicted regulatory interactions in Burkholderia sp. H160
Locus tag Position Score Sequence
Position: -107
Score: 5.5
Sequence: TCGAACGATCGTTCTT
Locus tag: BH160DRAFT_3347
BH160DRAFT_3347 -107 5.5 TCGAACGATCGTTCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nppD
Ortholog function: 2-nitropropane dioxygenase NPD
Ralstonia metallidurans CH34 Rmet_0222 -39 5.4 TCGAACGATCGTTCCA
Ralstonia eutropha JMP134 Reut_A0268 -58 5.2 TCGAACGACCGTTCAT
Ralstonia eutropha H16 H16_A0293 -59 5.2 TCGAACGACCGTTCAT
Cupriavidus taiwanensis RALTA_A0233 -58 5.2 TCGAACGACCGTTCAC
Position: -53
Score: 5.3
Sequence: TAGTACGGCCGTTCGA
Locus tag: BH160DRAFT_4125
BH160DRAFT_4125 -53 5.3 TAGTACGGCCGTTCGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fadP
Ortholog function: Predicted transcriptional regulator for fatty acid degradation FadP, TetR family
Ralstonia solanacearum GMI1000 RS04423 -136 5.7 TTGAACGATCGTTCGA
Ralstonia pickettii 12J Rpic_0347 -136 5.6 TTGAACGACCGTTCGA
Ralstonia metallidurans CH34 Rmet_0384 -142 4.9 CTGAACGACCGTTCTT
Ralstonia eutropha JMP134 Reut_A0445 -140 4.9 CTGAACGACCGTTCTT
Ralstonia eutropha H16 H16_A0459 -143 4.9 CTGAACGACCGTTCTT
Cupriavidus taiwanensis RALTA_A0402 -141 4.9 CTGAACGACCGTTCTT
Position: -47
Score: 5.4
Sequence: TTGCACGGTCGTGCTA
Locus tag: BH160DRAFT_6685
BH160DRAFT_6685 -47 5.4 TTGCACGGTCGTGCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: paaH1
Ortholog function: 3-hydroxybutyryl-CoA dehydrogenase, phenylacetic acid degradation
Ralstonia solanacearum GMI1000 RSc2013 -49 4.9 TCGCACGCTCGTGCTA
Ralstonia pickettii 12J Rpic_2168 -53 4.9 TCGCACGCTCGTGCTA
Ralstonia metallidurans CH34 Rmet_0974 -44 4.9 ACGTACGATCGTGCTA
Ralstonia eutropha JMP134 Reut_A1010 -43 4.9 ACGTACGATCGTGCTA
Ralstonia eutropha H16 H16_A1102 -43 4.9 ACGTACGATCGTGCTA
Cupriavidus taiwanensis RALTA_A1087 -31 4.9 ACGTACGATCGTGCTA