Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of CadR regulog to Corynebacterium glutamicum R

Reference regulog properties
Source regulog: CadR - Corynebacteriaceae
Regulator type: Transcription factor
Regulator family: ArsR
Regulation mode: repressor
Biological process: Cadmium resistance
Effector: Cadmium, ion (Cd2+)
Phylum: Actinobacteria
Propagated regulon:
Target genome Corynebacterium glutamicum R
Orthologous TF(s) cgR_0145, cgR_0161
Regulated genes 2
Built upon 18 sites [see more]
Predicted regulatory interactions in Corynebacterium glutamicum R
Locus tag Position Score Sequence
Position: -8
Score: 5.1
Sequence: GTCAGTGCATGCTGAC
Locus tag: cgR_0145
cgR_0145 -8 5.1 GTCAGTGCATGCTGAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: cadR
Ortholog function: Predicted cadmium resistance transcriptional regulator CdrR, ArsR family
Corynebacterium efficiens YS-314 CE0009 37 5.1 GTCAGCACCTGGTGTA
55 5 GTCAGCATATGCTGAC
Position: -8
Score: 6
Sequence: TTCAGCACATGCTGAC
Locus tag: cgR_0161
cgR_0161 -8 6 TTCAGCACATGCTGAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: cadR
Ortholog function: Predicted cadmium resistance transcriptional regulator CdrR, ArsR family
Corynebacterium glutamicum ATCC 13032 cg1032 -27 5.3 TTCAGCAACAGCTGTA
-8 5.8 TTCAGCGCATGCTGAC
Corynebacterium kroppenstedtii DSM 44385 ckrop_1433 -27 5.5 TTCAGCAGCCGCTGTA
-8 4.8 TCCAGTGCATGCTGAC