Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of BioQ regulog to Corynebacterium diphtheriae NCTC 13129

Reference regulog properties
Source regulog: BioQ - Corynebacteriaceae
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Biotin biosynthesis
Effector: Biotin
Phylum: Actinobacteria
Propagated regulon:
Target genome Corynebacterium diphtheriae NCTC 13129
Orthologous TF(s) DIP1571
Regulated genes 4
Built upon 24 sites [see more]
Predicted regulatory interactions in Corynebacterium diphtheriae NCTC 13129
Locus tag Position Score Sequence
Position: -15
Score: 5.6
Sequence: ATTAAACACCGTTCAAT
Locus tag: DIP0105
DIP0105 -15 5.6 ATTAAACACCGTTCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: bioB
Ortholog function: Biotin synthase (EC 2.8.1.6)
Corynebacterium aurimucosum ATCC 700975 cauri_0069 -30 6 CTTGAACGGTGTTCAAG
Corynebacterium diphtheriae NCTC 13129 DIP1124 -24 5.4 ATTGAAAGGTGTTCAAT
Corynebacterium diphtheriae NCTC 13129 DIP0105 -15 5.6 ATTAAACACCGTTCAAT
Corynebacterium efficiens YS-314 CE0089 -38 6.1 ATTGAACACTGTTCAAT
Corynebacterium glutamicum ATCC 13032 cg0095 -156 5.1 TTTGAACAGTGTTCAAA
-135 6.1 CTTGAACACTGTTCAAG
Corynebacterium jeikeium K411 jk0682 -76 5.4 ACTAAACAGCGTTCAAG
Corynebacterium kroppenstedtii DSM 44385 ckrop_0784 -87 6 ATTGAACAGTGTTCAGG
Position: -24
Score: 5.4
Sequence: ATTGAAAGGTGTTCAAT
Position: 11
Score: 5.4
Sequence: ATTGAACACAGTTCAGG
Locus tag: DIP1124
DIP1124 -24 5.4 ATTGAAAGGTGTTCAAT
11 5.4 ATTGAACACAGTTCAGG
Supported by regulated orthologs from reference regulons
Ortholog gene name: bioB
Ortholog function: Biotin synthase (EC 2.8.1.6)
Corynebacterium aurimucosum ATCC 700975 cauri_0069 -30 6 CTTGAACGGTGTTCAAG
Corynebacterium diphtheriae NCTC 13129 DIP1124 -24 5.4 ATTGAAAGGTGTTCAAT
Corynebacterium diphtheriae NCTC 13129 DIP0105 -15 5.6 ATTAAACACCGTTCAAT
Corynebacterium efficiens YS-314 CE0089 -38 6.1 ATTGAACACTGTTCAAT
Corynebacterium glutamicum ATCC 13032 cg0095 -156 5.1 TTTGAACAGTGTTCAAA
-135 6.1 CTTGAACACTGTTCAAG
Corynebacterium jeikeium K411 jk0682 -76 5.4 ACTAAACAGCGTTCAAG
Corynebacterium kroppenstedtii DSM 44385 ckrop_0784 -87 6 ATTGAACAGTGTTCAGG
Position: -26
Score: 5.6
Sequence: ATTAAACGGTGTTCAAT
Locus tag: DIP1191
DIP1191 -26 5.6 ATTAAACGGTGTTCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: bioA
Ortholog function: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)
Corynebacterium amycolatum SK46 CORAM0001_1898 -50 4.7 CCCGAACGTCGTTCAAG
Corynebacterium diphtheriae NCTC 13129 DIP1191 -103 6 ATTGAACGCTGTTCAAT
-26 5.6 ATTAAACGGTGTTCAAT
Corynebacterium efficiens YS-314 CE1421 -303 5.7 GTTGAACGGTGTTCAAT
-224 6.1 ATTGAACACTGTTCAAT
Corynebacterium glutamicum ATCC 13032 cg2885 -65 6.1 ATTGAACACTGTTCAAT
Corynebacterium kroppenstedtii DSM 44385 ckrop_0861 -29 5.8 ACTGAACACTGTTCAGT
Position: -20
Score: 5.4
Sequence: ATTGAACACTGTTTAAC
Locus tag: DIP1381
DIP1381 -20 5.4 ATTGAACACTGTTTAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: bioW
Ortholog function: Pimeloyl-CoA synthase (EC 6.2.1.14)
Corynebacterium diphtheriae NCTC 13129 DIP1381 -20 5.4 ATTGAACACTGTTTAAC
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