Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of DVUA0057 regulog to Desulfovibrio vulgaris str. Miyazaki F

Reference regulog properties
Source regulog: DVUA0057 - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode:
Biological process: Biofilm formation
Effector:
Phylum: Proteobacteria/Delta
Propagated regulon:
Target genome Desulfovibrio vulgaris str. Miyazaki F
Orthologous TF(s) DvMF_0670
Regulated genes 2
Built upon 29 sites [see more]
Predicted regulatory interactions in Desulfovibrio vulgaris str. Miyazaki F
Locus tag Position Score Sequence
Position: -257
Score: 4.6
Sequence: TGTCGGAAAAGACAACA
Position: -169
Score: 4.6
Sequence: TGTCGGATAGATTAACA
Locus tag: DvMF_0693
DvMF_0693 -257 4.6 TGTCGGAAAAGACAACA
-169 4.6 TGTCGGATAGATTAACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVUA0031
Ortholog function: protein of unknown function DUF1555
Desulfovibrio desulfuricans G20 Dde_0404 -274 4.2 TGTCGGAACTCATTACA
-167 5.2 TGTCGACTTATCTGACA
Desulfovibrio vulgaris Hildenborough DVUA0032 -257 4.5 TGTCGGAAAAGGCAACA
-168 4.9 TGTCGGATAGGTTGACA
Desulfovibrio vulgaris str. Miyazaki F DvMF_0693 -257 4.6 TGTCGGAAAAGACAACA
-169 4.6 TGTCGGATAGATTAACA
Position: -109
Score: 5.1
Sequence: TGTCGGAATTCCTGACA
Locus tag: DvMF_0694
DvMF_0694 -109 5.1 TGTCGGAATTCCTGACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVUA0031
Ortholog function: protein of unknown function DUF1555
Desulfovibrio vulgaris Hildenborough DVUA0031 -97 4.8 TGTCGGAGAACCTTACA
Desulfovibrio vulgaris str. Miyazaki F DvMF_0694 -109 5.1 TGTCGGAATTCCTGACA