Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Rex regulog to Thermotogales bacterium TBF 19.5.1

Reference regulog properties
Source regulog: Rex - Thermotogales
Regulator type: Transcription factor
Regulator family: Rex
Regulation mode: repressor
Biological process: Energy metabolism
Effector: NADH
Phylum: Thermotogae
Propagated regulon:
Target genome Thermotogales bacterium TBF 19.5.1
Orthologous TF(s) Kole_1558
Regulated genes 4
Built upon 114 sites [see more]
Predicted regulatory interactions in Thermotogales bacterium TBF 19.5.1
Locus tag Position Score Sequence
Position: -57
Score: 4.7
Sequence: TTGATAGAAAATTCACAA
Locus tag: Kole_0172
Kole_0172 -57 4.7 TTGATAGAAAATTCACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hycD
Ortholog function: NAD-reducing Fe-hydrogenase, subunit HycD (EC 1.12.7.2)
Thermotoga maritima MSB8 TM0201 24 5.3 TTGAGAAATTTATCACAA
Thermotoga sp. RQ2 TRQ2_0747 -54 5.3 TTGAGAAATTTATCACAA
Thermotoga neapolitana DSM 4359 CTN_0485 0 5.1 TTGAGAATTTTATCACAA
Thermotoga petrophila RKU-1 Tpet_0723 -54 5.3 TTGAGAAATTTATCACAA
Thermotoga naphthophila RKU-10 Tnap_0831 -54 5.3 TTGAGAAATTTATCACAA
Thermotoga lettingae TMO Tlet_1350 -42 4.7 ATGTGAATACTTTAACAA
Thermosipho africanus TCF52B THA_1808 -106 4.7 TTGTGAtAtaaTTtACtt
Thermosipho melanesiensis BI429 Tmel_1601 -108 4.7 TTGTGAtAtaaTTtACtt
Thermotogales bacterium TBF 19.5.1 Kole_0172 -57 4.7 TTGATAGAAAATTCACAA
Position: -70
Score: 4.6
Sequence: AAGTGAAATAAATAACAT
Locus tag: Kole_0180
Kole_0180 -70 4.6 AAGTGAAATAAATAACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hycA
Ortholog function: NAD-reducing Fe-hydrogenase, subunit HycA (EC 1.12.7.2)
Thermotoga maritima MSB8 TM0012 -27 4.3 aTGTGAAAAaaaTatCAg
-2 5 TTGTGAAAAaaTTCcCgA
Thermotoga sp. RQ2 TRQ2_0933 -69 4.3 ATGTGAAAAAAATATCAG
-44 5 TTGTGAAAAAATTCCCGA
Thermotoga neapolitana DSM 4359 CTN_0686 -61 4.3 ATGTGAAAAAAATATCAG
-36 5.2 TTGTGAAAAAATTCTCGA
Thermotoga petrophila RKU-1 Tpet_0911 -69 4.3 ATGTGAAAAAAATATCAG
-44 5 TTGTGAAAAAATTCCCGA
Thermotoga naphthophila RKU-10 Tnap_0643 -69 4.3 ATGTGAAAAAAATATCAG
-44 5 TTGTGAAAAAATTCCCGA
Thermotoga lettingae TMO Tlet_1522 -30 4.8 TTGTGAATTTATTAACAG
Thermosipho africanus TCF52B THA_782 -49 4.9 TcGTGAAAATaaTaACgt
-35 5 acGTtAtAtTTTTCACgA
Thermosipho africanus TCF52B THA_1559 -65 4.6 aaGTGAAAtTTTTtACtt
12 4.2 TTGTGAAAAacaTgtCgA
Thermosipho melanesiensis BI429 Tmel_1172 -68 4.5 aaGTGAAttTTTTtACtt
9 4.2 TTGTGAAAAacaTgtCgA
Fervidobacterium nodosum Rt17-B1 Fnod_0995 -38 4.8 ATGTTATAATAATCACGA
Petrotoga mobilis SJ95 Pmob_0726 -133 5.3 ATGTGAATATTTTCACAA
Thermotogales bacterium TBF 19.5.1 Kole_0180 -71 4.6 aaGTGAAAtaaaTaACAt
Position: -33
Score: 5.2
Sequence: AAGTGAAAAAATTCACAA
Locus tag: Kole_0742
Kole_0742 -33 5.2 AAGTGAAAAAATTCACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: adhA
Ortholog function: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent
Thermosipho africanus TCF52B THA_374 -95 5.3 TcGTGAAAAaaTTaACgA
-29 5.1 TTGTGAAAATATTCACAG
Thermosipho melanesiensis BI429 Tmel_0139 -95 4.7 ccGTGAAAAaaaTaACgA
-29 5.1 TTGTGAAAATATTCACAG
Fervidobacterium nodosum Rt17-B1 Fnod_1174 -78 5 AAGTGATTTTTTTCACAA
Thermotogales bacterium TBF 19.5.1 Kole_0742 -111 4.8 cTGTGAAAAaaTTCACAt
-33 5.2 AAGTGAAAAAATTCACAA
Position: -89
Score: 5.4
Sequence: TAGTTAATAATTTCACAA
Locus tag: Kole_2018
Kole_2018 -89 5.4 TAGTTAATAATTTCACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: dnaX
Ortholog function: DNA polymerase III subunits gamma and tau
Thermotoga maritima MSB8 TM0686 -104 5.1 TaGTtAtttTTTTCACgA
Thermotoga sp. RQ2 TRQ2_0243 -104 5.1 TAGTTATTTTTTTCACGA
Thermotoga neapolitana DSM 4359 CTN_1900 -103 5.1 TAGTTATTTTTTTCACGA
Thermotoga petrophila RKU-1 Tpet_0245 -104 5.1 TAGTTATTTTTTTCACGA
Thermotoga naphthophila RKU-10 Tnap_0482 -104 5.1 TAGTTATTTTTTTCACGA
Thermotoga lettingae TMO Tlet_1000 -29 4 cTGTtAtAATTTaatCAA
Thermotogales bacterium TBF 19.5.1 Kole_2018 -90 5.4 TaGTtAAtAaTTTCACAA
© 2009-2020 RegPrecise