Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of BglR regulog to Shewanella amazonensis SB2B

Reference regulog properties
Source regulog: BglR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Beta-glucosides utilization
Effector: Beta-glucoside
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Shewanella amazonensis SB2B
Orthologous TF(s) Sama_1400
Regulated genes 3
Built upon 24 sites [see more]
Predicted regulatory interactions in Shewanella amazonensis SB2B
Locus tag Position Score Sequence
Position: -97
Score: 7
Sequence: AATGTAAGCGCTTACATT
Locus tag: Sama_1396
Sama_1396 -97 7 AATGTAAGCGCTTACATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: lamA
Ortholog function: Beta-glucanase precursor (EC 3.2.1.73)
Shewanella denitrificans OS217 Sden_2604 -195 6.9 AATGAAAGCGCTTACATT
Shewanella frigidimarina NCIMB 400 Sfri_1319 -224 6.9 AATGAAAGCGCTTACATT
Shewanella amazonensis SB2B Sama_1396 -97 7 AATGTAAGCGCTTACATT
Shewanella piezotolerans WP3 swp_1638 -252 6.9 AATGAAAGCGCTTACATT
-191 6.9 AATGAAAGCGCTTACATT
Position: -134
Score: 6.9
Sequence: AATGTAAGCGCTTTCATT
Locus tag: Sama_1402
Sama_1402 -134 6.9 AATGTAAGCGCTTTCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: bglA1
Ortholog function: Cytoplasmic beta-glucosidase (EC 3.2.1.21)
Shewanella baltica OS155 Sbal_1131 -147 6.9 AATGTAAGCGCTTTCATT
Shewanella denitrificans OS217 Sden_2607 -177 6.9 AATGTAAGCGCTTTCATT
Shewanella frigidimarina NCIMB 400 Sfri_1316 -176 6.9 AATGTAAGCGCTTTCATT
Shewanella amazonensis SB2B Sama_1402 -134 6.9 AATGTAAGCGCTTTCATT
Shewanella piezotolerans WP3 swp_1634 -294 6.9 AATGTAAGCGCTTTCATT
-233 6.9 AATGTAAGCGCTTTCATT
Shewanella woodyi ATCC 51908 Swoo_1147 -199 6.4 GATGTAAGCGCTTTCATT
Position: -111
Score: 6.9
Sequence: AATGAAAGCGCTTACATT
Locus tag: Sama_1403
Sama_1403 -111 6.9 AATGAAAGCGCTTACATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: glcP
Ortholog function: Predicted glucose transporter in beta-glucoside utilization gene cluster
Shewanella amazonensis SB2B Sama_1403 -111 6.9 AATGAAAGCGCTTACATT
Shewanella piezotolerans WP3 swp_1636 -252 6.9 AATGAAAGCGCTTACATT
-191 6.9 AATGAAAGCGCTTACATT
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