Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of PsrA regulog to Moritella sp. PE36

Reference regulog properties
Source regulog: PsrA - Shewanellaceae
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Fatty acid degradation
Effector: Oleate
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Moritella sp. PE36
Orthologous TF(s) PE36_04678
Regulated genes 6
Built upon 295 sites [see more]
Predicted regulatory interactions in Moritella sp. PE36
Locus tag Position Score Sequence
Position: -138
Score: 5.6
Sequence: AATCATACGACTGTTTAAAT
Locus tag: PE36_17450
PE36_17450 -138 5.6 AATCATACGACTGTTTAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fadD2
Ortholog function: long-chain-fatty-acid--CoA ligase
Shewanella oneidensis MR-1 SO_3664 -63 5.6 ATCTAAACACCCGTTTGATT
Shewanella putrefaciens CN-32 Sputcn32_0970 -66 5.5 ATCTAAACATATGTTTGATT
Shewanella sp W3-18-1 Sputw3181_3197 -65 5.5 ATCTAAACATATGTTTGATT
Shewanella sp ANA-3 Shewana3_3231 -62 5.6 ATCTAAACACTCGTTTGATT
Shewanella sp MR-4 Shewmr4_0883 -62 5.6 ATCTAAACACTCGTTTGATT
Shewanella sp MR-7 Shewmr7_3139 -62 5.6 ATCTAAACACTCGTTTGATT
Shewanella baltica OS155 Sbal_0956 -66 5.4 ATCTAAACACCTGTTTAACT
Shewanella frigidimarina NCIMB 400 Sfri_3097 -55 5.5 ATCTAAACGGACGTTTGATT
Shewanella loihica PV-4 Shew_3084 -130 5.3 TGTTAAACGATTGTTTTATT
-70 5.1 GTCTAAACACCTGTTTGATT
Shewanella pealeana ATCC 700345 Spea_3322 -70 5.6 ATCTAAACGCTTGTTTGATT
Shewanella halifaxensis HAW-EB4 Shal_3395 -62 4.8 gTcTAAACAGCTGTTTgAcT
Shewanella piezotolerans WP3 swp_3965 -66 5.7 ATCTAAACACCTGTTTGATT
Shewanella sediminis HAW-EB3 Ssed_3695 -83 5.6 ATCTAAACGCCTGTTTGATT
Shewanella woodyi ATCC 51908 Swoo_3995 -95 5.7 ATCTAAACACCTGTTTGATT
Position: -96
Score: 5.3
Sequence: TTTCAAACTAATGTTTGAAT
Locus tag: PE36_17987
PE36_17987 -96 5.3 TTTCAAACTAATGTTTGAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fadI
Ortholog function: fatty oxidation complex, beta subunit
Shewanella oneidensis MR-1 SO_3089 -163 5.4 AAACAAACAGGTGTTTAAAA
Shewanella putrefaciens CN-32 Sputcn32_2460 -168 5.4 AAACAAACAGGTGTTTAAAA
Shewanella sp W3-18-1 Sputw3181_1548 -168 5.4 AAACAAACAGGTGTTTAAAA
Shewanella sp ANA-3 Shewana3_1460 -167 5.4 AAACAAACAGGTGTTTAAAA
Shewanella sp MR-4 Shewmr4_1407 -167 5.4 AAACAAACAGGTGTTTAAAA
Shewanella sp MR-7 Shewmr7_1472 -167 5.4 AAACAAACAGGTGTTTAAAA
Shewanella baltica OS155 Sbal_2761 -168 5.4 AAACAAACAGGTGTTTAAAA
Shewanella denitrificans OS217 Sden_1529 -141 5.4 AAATAAACGGGTGTTTAAAA
Shewanella frigidimarina NCIMB 400 Sfri_2677 -136 5.4 TTGTAAACGCCTGTTTAAAA
Shewanella amazonensis SB2B Sama_2168 -144 5.6 ATGCAAACAAGTGTTTAAAA
Shewanella loihica PV-4 Shew_2426 -166 5.4 AACCAAACAGGTGTTTAAAA
Shewanella pealeana ATCC 700345 Spea_2599 -148 5.4 AAACAAACAAGTGTTTAAAA
Shewanella halifaxensis HAW-EB4 Shal_2671 -151 5.4 AAACAAACAAGTGTTTAAAA
Shewanella piezotolerans WP3 swp_3140 -154 5.4 AAACAAACAAGTGTTTAAAA
Shewanella sediminis HAW-EB3 Ssed_1628 -183 5.4 AACCAAACAACTGTTTAAAA
Shewanella woodyi ATCC 51908 Swoo_3027 -170 5.4 AACCAAACAAGTGTTTAAAA
Position: -135
Score: 5.5
Sequence: AGTTAAACAGTCGTTTAAAA
Locus tag: PE36_15295
PE36_15295 -135 5.5 AGTTAAACAGTCGTTTAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fadB
Ortholog function: fatty oxidation complex, alpha subunit
Shewanella oneidensis MR-1 SO_0021 -162 6.1 AATTAAACAGTCGTTTAAAT
Shewanella putrefaciens CN-32 Sputcn32_0013 -162 6.1 AATTAAACAGTCGTTTAAAT
Shewanella sp W3-18-1 Sputw3181_0013 -162 6.1 AATTAAACAGTCGTTTAAAT
Shewanella sp ANA-3 Shewana3_0024 -162 6.1 AATTAAACAGTCGTTTAAAT
Shewanella sp MR-4 Shewmr4_0018 -162 6.1 AATTAAACAGTCGTTTAAAT
Shewanella sp MR-7 Shewmr7_0016 -162 6.1 AATTAAACAGTCGTTTAAAT
Shewanella baltica OS155 Sbal_0021 -162 6.1 AATTAAACAGTCGTTTAAAT
Shewanella denitrificans OS217 Sden_0015 -149 6.1 AATTAAACGGCCGTTTAAAT
Shewanella frigidimarina NCIMB 400 Sfri_0013 -161 6.1 AATTAAACGGCCGTTTAAAT
Shewanella amazonensis SB2B Sama_0032 -145 5.9 AATTAAACGATCGTTTTAAT
Shewanella loihica PV-4 Shew_0019 -161 6.1 AATTAAACAAGTGTTTAAAT
Shewanella pealeana ATCC 700345 Spea_0018 -168 5.6 AACTAAACGGTCGTTTAAAT
Shewanella halifaxensis HAW-EB4 Shal_0016 -168 5.5 AACCAAACGACCGTTTAAAT
Shewanella piezotolerans WP3 swp_0035 -161 5.5 ATTCGAACACTCGTTTAAAT
Shewanella sediminis HAW-EB3 Ssed_0023 -228 6.1 AATCAAACACCCGTTTAAAT
Shewanella woodyi ATCC 51908 Swoo_0021 -166 6.1 AATCAAACAAGTGTTTAAAT
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