Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of FadR regulog to Alteromonadales bacterium TW-7

Reference regulog properties
Source regulog: FadR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor (activator)
Biological process: Fatty acid degradation
Effector: Palmitoyl-CoA; Oleoyl-CoA
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Alteromonadales bacterium TW-7
Orthologous TF(s) ATW7_09751
Regulated genes 2
Built upon 101 sites [see more]
Predicted regulatory interactions in Alteromonadales bacterium TW-7
Locus tag Position Score Sequence
Position: -32
Score: 5.1
Sequence: AACAGGTCAGACCTGTC
Locus tag: ATW7_05611
ATW7_05611 -32 5.1 AACAGGTCAGACCTGTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fadI
Ortholog function: FadI component of anaerobic fatty acid oxidation complex
Shewanella oneidensis MR-1 SO_3089 -109 5.2 TAATGGTCAGACCTGTT
Shewanella putrefaciens CN-32 Sputcn32_2460 -114 5.2 TAATGGTCAGACCTGTT
Shewanella sp W3- Error

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

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