Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing rutR gene

Properties
Regulog: RutR - Pseudomonadaceae
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Pyrimidine utilization
Effector: Uracil
Phylum: Proteobacteria/gamma
Built upon 29 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Pseudomonas aeruginosa PAO1
Position: -77
Score: 5.27576
Sequence: AGCTGATCACCTGGACAGCT
Locus tag: PA0166
Name: pbuT
Funciton: Xanthine/uracil permease
Locus tag: PA0167
Name: rutR
Funciton: Transcriptional regulator RutR of pyrimidine catabolism, TetR family
Locus tag: PA0168
Name: COG1739
Funciton: hypothetical protein, COG1739
pbuT-rutR-COG1739 -77 5.3 AGCTGATCACCTGGACAGCT PA0166
Pseudomonas fluorescens Pf-5
Position: -22
Score: 5.34522
Sequence: ACCTGAGCACCTGGACAGCT
Locus tag: PFL_0731
Name: pbuT
Funciton: Xanthine/uracil permease
Locus tag: PFL_0730
Name: rutR
Funciton: Transcriptional regulator RutR of pyrimidine catabolism, TetR family
Locus tag: PFL_0729
Name: COG1739
Funciton: hypothetical protein, COG1739
pbuT-rutR-COG1739 -22 5.3 ACCTGAGCACCTGGACAGCT PFL_0731
Pseudomonas mendocina ymp
Position: -92
Score: 5.39399
Sequence: AGCTGATCAGTTGGACAGCT
Position: -54
Score: 5.72201
Sequence: ACCTGACCACACGGCCAGGA
Locus tag: Pmen_3697
Name: tsx3
Funciton: Nucleoside-binding outer membrane protein
Locus tag: Pmen_3698
Name: pbuT
Funciton: Xanthine/uracil permease
Locus tag: Pmen_3699
Name: rutR
Funciton: Transcriptional regulator RutR of pyrimidine catabolism, TetR family
Locus tag: Pmen_3700
Name: COG1739
Funciton: hypothetical protein, COG1739
tsx3-pbuT-rutR-COG1739 -92 5.4 AGCTGATCAGTTGGACAGCT Pmen_3697
-54 5.7 ACCTGACCACACGGCCAGGA
Pseudomonas syringae pv. tomato str. DC3000
Position: -83
Score: 5.05087
Sequence: ACCTGAGCAGGTGGACAGTT
Locus tag: PSPTO0772
Name: pbuT
Funciton: Xanthine/uracil permease
Locus tag: PSPTO0771
Name: rutR
Funciton: Transcriptional regulator RutR of pyrimidine catabolism, TetR family
Locus tag: PSPTO0770
Name: COG1739
Funciton: hypothetical protein, COG1739
pbuT-rutR-COG1739 -83 5.1 ACCTGAGCAGGTGGACAGTT PSPTO0772