Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing deoB gene

Properties
Regulog: RutR - Rhodobacterales
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Pyrimidine utilization
Effector: Uracil
Phylum: Proteobacteria/alpha
Built upon 62 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Rhodobacterales bacterium HTCC2654
Position: -29
Score: 5.04047
Sequence: ACTGGACCATACGGTCAAAG
Locus tag: RB2654_20823
Name: cdd
Funciton: Cytidine deaminase (EC 3.5.4.5)
Locus tag: RB2654_20828
Name: deoB
Funciton: Phosphopentomutase (EC 5.4.2.7)
Locus tag: RB2654_20833
Name: add
Funciton: Adenosine deaminase (EC 3.5.4.4)
Locus tag: RB2654_20838
Name: upp
Funciton: Uracil phosphoribosyltransferase (EC 2.4.2.9)
cdd-deoB-add-upp -29 5 ACTGGACCATACGGTCAAAG RB2654_20823
Silicibacter TM1040
Position: -52
Score: 5.78603
Sequence: ATTTGACCATCCGATCAAAA
Locus tag: TM1040_1572
Name: cdd
Funciton: Cytidine deaminase (EC 3.5.4.5)
Locus tag: TM1040_1571
Name: deoA
Funciton: Thymidine phosphorylase (EC 2.4.2.4)
Locus tag: TM1040_1570
Name: deoB
Funciton: Phosphopentomutase (EC 5.4.2.7)
Locus tag: TM1040_1569
Name: upp
Funciton: Uracil phosphoribosyltransferase (EC 2.4.2.9)
cdd-deoA-deoB-upp -52 5.8 ATTTGACCATCCGATCAAAA TM1040_1572
Silicibacter pomeroyi DSS-3
Position: -34
Score: 5.09406
Sequence: TTCCGACCAGATGATCAAAA
Locus tag: SPO2930
Name: cdd
Funciton: Cytidine deaminase (EC 3.5.4.5)
Locus tag: SPO2929
Name: deoA
Funciton: Thymidine phosphorylase (EC 2.4.2.4)
Locus tag: SPO2928
Name: deoB
Funciton: Phosphopentomutase (EC 5.4.2.7)
Locus tag: SPO2927
Name: add
Funciton: Adenosine deaminase (EC 3.5.4.4)
Locus tag: SPO2926
Name: upp
Funciton: Uracil phosphoribosyltransferase (EC 2.4.2.9)
cdd-deoA-deoB-add-upp -34 5.1 TTCCGACCAGATGATCAAAA SPO2930