Orthologous regulated operons containing codA gene

Properties
Regulog:	RutR - Rhodobacterales
Regulator type:	Transcription factor
Regulator family:	TetR
Regulation mode:	repressor
Biological process:	Pyrimidine utilization
Effector:	Uracil
Phylum:	Proteobacteria/alpha

Built upon 62 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Jannaschia sp. CCS1
Position: -36 Score: 5.45752 Sequence: ATTTTACCATATGGTAAGGA Locus tag: Jann_1306 Name: codA Funciton: Cytosine deaminase (EC 3.5.4.1) Locus tag: Jann_1305 Name: pytM Funciton: Predicted pyrimidine ABC transporter, substrate-binding protein Locus tag: Jann_1304 Name: amiC Funciton: Predicted amidase Locus tag: Jann_1303 Name: pytN Funciton: Predicted pyrimidine ABC transporter, ATP-binding protein Locus tag: Jann_1302 Name: pytO Funciton: Predicted pyrimidine ABC transporter, permease protein 1 Locus tag: Jann_1301 Name: pytQ Funciton: Predicted pyrimidine ABC transporter, permease protein 2
codA-pytM-amiC-pytN-pytO-pytQ	-36	5.5	ATTTTACCATATGGTAAGGA	Jann_1306
Roseobacter sp. MED193
Position: 74 Score: 4.99615 Sequence: TTTTTACCCTTTGGACAAGA Locus tag: MED193_17244 Name: pytM Funciton: Predicted pyrimidine ABC transporter, substrate-binding protein Locus tag: MED193_17239 Name: pytN Funciton: Predicted pyrimidine ABC transporter, ATP-binding protein Locus tag: MED193_17234 Name: pytO Funciton: Predicted pyrimidine ABC transporter, permease protein 1 Locus tag: MED193_17229 Name: pytQ Funciton: Predicted pyrimidine ABC transporter, permease protein 2 Locus tag: MED193_17224 Name: codA Funciton: Cytosine deaminase (EC 3.5.4.1)
pytM-pytN-pytO-pytQ-codA	74	5	TTTTTACCCTTTGGACAAGA	MED193_17244
Roseovarius nubinhibens ISM
Position: -53 Score: 5.78057 Sequence: TCTTTACCGTTTGGTAAAAT Locus tag: ISM_11210 Name: pytM Funciton: Predicted pyrimidine ABC transporter, substrate-binding protein Locus tag: ISM_11215 Name: pytN Funciton: Predicted pyrimidine ABC transporter, ATP-binding protein Locus tag: ISM_11220 Name: pytO Funciton: Predicted pyrimidine ABC transporter, permease protein 1 Locus tag: ISM_11225 Name: pytQ Funciton: Predicted pyrimidine ABC transporter, permease protein 2 Locus tag: ISM_11230 Name: codA Funciton: Cytosine deaminase (EC 3.5.4.1)
pytM-pytN-pytO-pytQ-codA	-53	5.8	TCTTTACCGTTTGGTAAAAT	ISM_11210
Roseovarius sp. 217
Position: -44 Score: 6.21258 Sequence: ATTTTACCAATTGGTAAAAC Locus tag: ROS217_10977 Name: pytM Funciton: Predicted pyrimidine ABC transporter, substrate-binding protein Locus tag: ROS217_10972 Name: pytN Funciton: Predicted pyrimidine ABC transporter, ATP-binding protein Locus tag: ROS217_10967 Name: pytO Funciton: Predicted pyrimidine ABC transporter, permease protein 1 Locus tag: ROS217_10962 Name: pytQ Funciton: Predicted pyrimidine ABC transporter, permease protein 2 Locus tag: ROS217_10957 Name: codA Funciton: Cytosine deaminase (EC 3.5.4.1)
pytM-pytN-pytO-pytQ-codA	-44	6.2	ATTTTACCAATTGGTAAAAC	ROS217_10977
Silicibacter pomeroyi DSS-3
Position: 11 Score: 4.96185 Sequence: AATTGACTGCTCGGTAAAAA Locus tag: SPO2802 Name: pytM Funciton: Predicted pyrimidine ABC transporter, substrate-binding protein Locus tag: SPO2803 Name: pytN Funciton: Predicted pyrimidine ABC transporter, ATP-binding protein Locus tag: SPO2804 Name: pytO Funciton: Predicted pyrimidine ABC transporter, permease protein 1 Locus tag: SPO2805 Name: pytQ Funciton: Predicted pyrimidine ABC transporter, permease protein 2 Locus tag: SPO2806 Name: codA Funciton: Cytosine deaminase (EC 3.5.4.1)
pytM-pytN-pytO-pytQ-codA	11	5	AATTGACTGCTCGGTAAAAA	SPO2802