Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing pydX gene

Properties
Regulog: RutR - Rhodobacterales
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Pyrimidine utilization
Effector: Uracil
Phylum: Proteobacteria/alpha
Built upon 62 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Jannaschia sp. CCS1
Position: -76
Score: 5.76894
Sequence: ATTTTACCATTTGATAAATT
Locus tag: Jann_2713
Name: pydX
Funciton: Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism
Locus tag: Jann_2712
Name: pydA
Funciton: Dihydropyrimidine dehydrogenase [NADP+] (EC 1.3.1.2)
pydX-pydA -76 5.8 ATTTTACCATTTGATAAATT Jann_2713
Loktanella vestfoldensis SKA53
Position: -67
Score: 5.76987
Sequence: AATTTACCGTTTGATAAAAA
Locus tag: SKA53_10689
Name: pydX
Funciton: Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism
Locus tag: SKA53_10684
Name: pydA
Funciton: Dihydropyrimidine dehydrogenase [NADP+] (EC 1.3.1.2)
pydX-pydA -67 5.8 AATTTACCGTTTGATAAAAA SKA53_10689
Oceanicola batsensis HTCC2597
Position: -66
Score: 5.92024
Sequence: AATTTACCATTTGATAAAAA
Locus tag: OB2597_04355
Name: pydX
Funciton: Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism
Locus tag: OB2597_04350
Name: OB2597_04350
Funciton: Hypothetical protein
Locus tag: OB2597_04345
Name: pydA
Funciton: Dihydropyrimidine dehydrogenase [NADP+] (EC 1.3.1.2)
pydX-OB2597_04350-pydA -66 5.9 AATTTACCATTTGATAAAAA OB2597_04355
Oceanicola granulosus HTCC2516
Position: -62
Score: 6.02039
Sequence: ATTTTACCGTTTGATAAAAT
Locus tag: OG2516_10926
Name: pydX
Funciton: Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism
Locus tag: OG2516_10921
Name: pydA
Funciton: Dihydropyrimidine dehydrogenase [NADP+] (EC 1.3.1.2)
pydX-pydA -62 6 ATTTTACCGTTTGATAAAAT OG2516_10926
Rhodobacter sphaeroides 2.4.1
Position: -74
Score: 5.38228
Sequence: TATTTATCGTTTGGTAAAAA
Locus tag: RSP_0189
Name: pydX
Funciton: Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism
Locus tag: RSP_0188
Name: RSP_0188
Funciton: DedA family integral membrane protein
Locus tag: RSP_0187
Name: pydA
Funciton: Dihydropyrimidine dehydrogenase [NADP+] (EC 1.3.1.2)
pydX-RSP_0188-pydA -74 5.4 TATTTATCGTTTGGTAAAAA RSP_0189
Rhodobacterales bacterium HTCC2654
Position: -337
Score: 6.14879
Sequence: TTTTTACCAATTGATAAAAA
Locus tag: RB2654_14990
Name: pydX
Funciton: Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism
Locus tag: RB2654_14980
Name: pydX
Funciton: Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism
pydX-pydX -337 6.1 TTTTTACCAATTGATAAAAA RB2654_14990
Roseobacter sp. MED193
Position: -74
Score: 6.10778
Sequence: ATTTTACCAGTTGATAAAAA
Locus tag: MED193_05534
Name: pydX
Funciton: Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism
Locus tag: MED193_05529
Name: pydA
Funciton: Dihydropyrimidine dehydrogenase [NADP+] (EC 1.3.1.2)
pydX-pydA -74 6.1 ATTTTACCAGTTGATAAAAA MED193_05534
Roseovarius nubinhibens ISM
Position: -75
Score: 6.19266
Sequence: ATTTTACCAATTGATAAAAT
Locus tag: ISM_13640
Name: pydX
Funciton: Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism
Locus tag: ISM_13635
Name: pydA
Funciton: Dihydropyrimidine dehydrogenase [NADP+] (EC 1.3.1.2)
pydX-pydA -75 6.2 ATTTTACCAATTGATAAAAT ISM_13640
Roseovarius sp. 217
Position: -69
Score: 6.19266
Sequence: ATTTTACCAATTGATAAAAT
Locus tag: ROS217_06720
Name: pydX
Funciton: Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism
Locus tag: ROS217_06715
Name: pydA
Funciton: Dihydropyrimidine dehydrogenase [NADP+] (EC 1.3.1.2)
pydX-pydA -69 6.2 ATTTTACCAATTGATAAAAT ROS217_06720
Silicibacter TM1040
Position: -91
Score: 6.10778
Sequence: ATTTTACCAGTTGATAAAAA
Locus tag: TM1040_1501
Name: pydX
Funciton: Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism
Locus tag: TM1040_1500
Name: pydA
Funciton: Dihydropyrimidine dehydrogenase [NADP+] (EC 1.3.1.2)
pydX-pydA -91 6.1 ATTTTACCAGTTGATAAAAA TM1040_1501
Silicibacter pomeroyi DSS-3
Position: -89
Score: 5.12353
Sequence: TTTTGACCGAAAGATAAATT
Position: -72
Score: 6.07918
Sequence: ATTTTACCAGTTGATAAAAT
Locus tag: SPO1776
Name: pydX
Funciton: Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism
Locus tag: SPO1777
Name: pydA
Funciton: Dihydropyrimidine dehydrogenase [NADP+] (EC 1.3.1.2)
pydX-pydA -89 5.1 TTTTGACCGAAAGATAAATT SPO1776
-72 6.1 ATTTTACCAGTTGATAAAAT
Sulfitobacter sp. EE-36
Position: -72
Score: 6.10778
Sequence: ATTTTACCAGTTGATAAAAA
Locus tag: EE36_09043
Name: pydX
Funciton: Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism
Locus tag: EE36_09048
Name: pydA
Funciton: Dihydropyrimidine dehydrogenase [NADP+] (EC 1.3.1.2)
pydX-pydA -72 6.1 ATTTTACCAGTTGATAAAAA EE36_09043
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