Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing rpsO gene

Properties
Regulator type: RNA regulatory element
Name: S15
RFAM: RF00114
Regulation mode:
Biological process: Ribosome biogenesis
Effector:
Phylum: Firmicutes
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Lactobacillus brevis ATCC 367
Position: -53
Score: 13.85
Sequence: CACCGCCGGCTTACT...
Locus tag: LVIS_1392
Name: rpsO
Funciton: SSU ribosomal protein S15p (S13e)
rpsO -53 13.9 CACCGCCGGCTTACT... LVIS_1392
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365
Position: -82
Score: 14.07
Sequence: GTGAACCCCGGACGT...
Locus tag: LBUL_0706
Name: rpsO
Funciton: SSU ribosomal protein S15p (S13e)
rpsO -82 14.1 GTGAACCCCGGACGT... LBUL_0706
Lactobacillus johnsonii NCC 533
Position: -73
Score: 23.24
Sequence: ATTGACGCTGTTTTC...
Locus tag: LJ1006
Name: rpsO
Funciton: SSU ribosomal protein S15p (S13e)
rpsO -73 23.2 ATTGACGCTGTTTTC... LJ1006
Lactobacillus reuteri JCM 1112
Position: -75
Score: 15.92
Sequence: TTCTCAGTTTAACGA...
Locus tag: LAR_0625
Name: rpsO
Funciton: SSU ribosomal protein S15p (S13e)
rpsO -75 15.9 TTCTCAGTTTAACGA... LAR_0625
Lactobacillus sakei subsp. sakei 23K
Position: -70
Score: 18.73
Sequence: TCTGTTTAGCGACGT...
Locus tag: LSA1066
Name: rpsO
Funciton: SSU ribosomal protein S15p (S13e)
rpsO -70 18.7 TCTGTTTAGCGACGT... LSA1066
Lactobacillus salivarius subsp. salivarius UCC118
Position: -75
Score: 14.55
Sequence: CTTTTTACTGAGTTT...
Locus tag: LSL_0638
Name: rpsO
Funciton: SSU ribosomal protein S15p (S13e)
rpsO -75 14.6 CTTTTTACTGAGTTT... LSL_0638
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
Position: -65
Score: 17.04
Sequence: TTGTTGAGCGGCTCA...
Locus tag: LEUM_1582
Name: rpsO
Funciton: SSU ribosomal protein S15p (S13e)
rpsO -65 17 TTGTTGAGCGGCTCA... LEUM_1582
Oenococcus oeni PSU-1
Position: -62
Score: 22.83
Sequence: CTTTTCGCGAACCTA...
Locus tag: OEOE_1283
Name: rpsO
Funciton: SSU ribosomal protein S15p (S13e)
rpsO -62 22.8 CTTTTCGCGAACCTA... OEOE_1283
Pediococcus pentosaceus ATCC 25745
Position: -54
Score: 25.61
Sequence: ATCTGCCGACGATTT...
Locus tag: PEPE_1146
Name: rpsO
Funciton: SSU ribosomal protein S15p (S13e)
rpsO -54 25.6 ATCTGCCGACGATTT... PEPE_1146