Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing csgA gene

Properties
Regulog: LiuR - Rhodospirillales
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: repressor
Biological process: Branched-chain amino acid degradation
Effector:
Phylum: Proteobacteria/alpha
Built upon 17 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Rhodospirillum rubrum ATCC 11170
Position: -194
Score: 5.79697
Sequence: TTTGACGTTTACGTAAAC
Position: -188
Score: 4.95051
Sequence: GTTTACGTAAACGGAAGA
Locus tag: Rru_A1948
Name: liuA
Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Butyryl-CoA dehydrogenase (EC 1.3.99.2)
Locus tag: Rru_A1947
Name: null
Funciton: nucleotidyltransferase-like
Locus tag: Rru_A1946
Name: ivdA
Funciton: Acetyl-CoA C-acyltransferase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Locus tag: Rru_A1945
Name: csgA
Funciton: Short-chain dehydrogenase/reductase SDR( EC:1.1.1.184 )
Locus tag: Rru_A1944
Name: Rru_A1944
Funciton: 2-hydroxychromene-2-carboxylate isomerase (EC 5.3.99.-)
Locus tag: Rru_A1943
Name: liuD
Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
Locus tag: Rru_A1942
Name: liuC
Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
Locus tag: Rru_A1941
Name: liuB
Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
Locus tag: Rru_A1940
Name: liuE
Funciton: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
liuA-Rru_A1947-ivdA-csgA-Rru_A1944-liuD-liuC-liuB-liuE -194 5.8 TTTGACGTTTACGTAAAC Rru_A1948
-188 5 GTTTACGTAAACGGAAGA