Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing prpB gene

Properties
Regulog: PrpR - Oceanospirillales/Alteromonadales
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Methylcitrate utilization
Effector: 2-methylcitrate
Phylum: Proteobacteria/gamma
Built upon 25 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Alcanivorax borkumensis SK2
Position: -86
Score: 5.37094
Sequence: ATTGTCAACAAT
Position: -23
Score: 5.37094
Sequence: ATTGTCAACAAT
Locus tag: ABO_1434
Name: prpR
Funciton: Propionate catabolism transcriptional regulator, GntR family
Locus tag: ABO_1433
Name: prpB
Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: ABO_1432
Name: prpC
Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
Locus tag: ABO_1431
Name: acnD
Funciton: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
Locus tag: ABO_1430
Name: prpF
Funciton: Aconitase accessory protein PrpF
Locus tag: ABO_1429
Name: prpD
Funciton: 2-methylcitrate dehydratase (EC 4.2.1.79)
prpR-prpB-prpC-acnD-prpF-prpD -86 5.4 ATTGTCAACAAT ABO_1434
-23 5.4 ATTGTCAACAAT
Chromohalobacter salexigens DSM 3043
Position: -132
Score: 5.82454
Sequence: ATTGTCGACAAT
Position: -15
Score: 5.82454
Sequence: ATTGTCGACAAT
Locus tag: Csal_2422
Name: prpR
Funciton: Propionate catabolism transcriptional regulator, GntR family
Locus tag: Csal_2421
Name: prpB
Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: Csal_2420
Name: prpC
Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
Locus tag: Csal_2419
Name: prpD
Funciton: 2-methylcitrate dehydratase (EC 4.2.1.79)
prpR-prpB-prpC-prpD -132 5.8 ATTGTCGACAAT Csal_2422
-15 5.8 ATTGTCGACAAT
Hahella chejuensis KCTC 2396
Position: -74
Score: 4.82561
Sequence: ATTGTTTACAAT
Position: -12
Score: 4.67165
Sequence: ATTGTAAACAAT
Locus tag: HCH_02709
Name: prpR
Funciton: Propionate catabolism transcriptional regulator, GntR family
Locus tag: HCH_02710
Name: prpB
Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: HCH_02711
Name: prpC
Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
Locus tag: HCH_02712
Name: prpD
Funciton: 2-methylcitrate dehydratase (EC 4.2.1.79)
prpR-prpB-prpC-prpD -74 4.8 ATTGTTTACAAT HCH_02709
-12 4.7 ATTGTAAACAAT
Marinobacter aqueolei
Position: -66
Score: 5.36427
Sequence: ATTGTTGACAAT
Position: -14
Score: 4.21805
Sequence: ATTGTTAACAAA
Locus tag: Maqu_1667
Name: prpR
Funciton: Propionate catabolism transcriptional regulator, GntR family
Locus tag: Maqu_1666
Name: prpB
Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: Maqu_1665
Name: prpC
Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
Locus tag: Maqu_1664
Name: acnD
Funciton: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
Locus tag: Maqu_1663
Name: prpF
Funciton: Aconitase accessory protein PrpF
Locus tag: Maqu_1662
Name: prpD
Funciton: 2-methylcitrate dehydratase (EC 4.2.1.79)
prpR-prpB-prpC-acnD-prpF-prpD -66 5.4 ATTGTTGACAAT Maqu_1667
-14 4.2 ATTGTTAACAAA
Marinobacter sp. ELB17
Position: -65
Score: 5.36427
Sequence: ATTGTTGACAAT
Position: -14
Score: 4.21805
Sequence: ATTGTTAACAAA
Locus tag: MELB17_14501
Name: prpR
Funciton: Propionate catabolism transcriptional regulator, GntR family
Locus tag: MELB17_14496
Name: prpB
Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: MELB17_14491
Name: prpC
Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
prpR-prpB-prpC -65 5.4 ATTGTTGACAAT MELB17_14501
-14 4.2 ATTGTTAACAAA
Marinomonas sp. MWYL1
Position: -268
Score: 4.68522
Sequence: ATTGTCGACACA
Position: -83
Score: 5.82454
Sequence: ATTGTCGACAAT
Position: -30
Score: 5.37094
Sequence: ATTGTCAACAAT
Locus tag: Mmwyl1_0926
Name: prpR
Funciton: Propionate catabolism transcriptional regulator, GntR family
Locus tag: Mmwyl1_0925
Name: prpB
Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: Mmwyl1_0924
Name: prpC
Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
Locus tag: Mmwyl1_0923
Name: prpD
Funciton: 2-methylcitrate dehydratase (EC 4.2.1.79)
prpR-prpB-prpC-prpD -268 4.7 ATTGTCGACACA Mmwyl1_0926
-83 5.8 ATTGTCGACAAT
-30 5.4 ATTGTCAACAAT
Oceanobacter sp. RED65
Position: -78
Score: 4.58659
Sequence: TTTGTCTACAAT
Position: -16
Score: 5.12525
Sequence: ATTGTAGACAAT
Locus tag: RED65_03680
Name: prpR
Funciton: Propionate catabolism transcriptional regulator, GntR family
Locus tag: RED65_03675
Name: prpB
Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: RED65_03670
Name: prpC
Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
Locus tag: RED65_03665
Name: acnD
Funciton: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
Locus tag: RED65_03660
Name: prpF
Funciton: Aconitase accessory protein PrpF
prpR-prpB-prpC-acnD-prpF -78 4.6 TTTGTCTACAAT RED65_03680
-16 5.1 ATTGTAGACAAT
Oceanospirillum sp. MED92
Position: -93
Score: 4.11965
Sequence: TGTGTTGACAAT
Position: -21
Score: 5.82454
Sequence: ATTGTCGACAAT
Locus tag: MED92_04442
Name: prpR
Funciton: Propionate catabolism transcriptional regulator, GntR family
Locus tag: MED92_04447
Name: prpB
Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: MED92_04452
Name: prpC
Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
Locus tag: MED92_04457
Name: acnD
Funciton: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
prpR-prpB-prpC-acnD -93 4.1 TGTGTTGACAAT MED92_04442
-21 5.8 ATTGTCGACAAT
Reinekea sp. MED297
Position: -77
Score: 4.91067
Sequence: ATTGTTAACAAT
Position: -14
Score: 4.21805
Sequence: ATTGTTAACAAA
Locus tag: MED297_14280
Name: prpR
Funciton: Propionate catabolism transcriptional regulator, GntR family
Locus tag: MED297_14285
Name: prpB
Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: MED297_14290
Name: prpC
Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
Locus tag: MED297_14295
Name: acnD
Funciton: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
Locus tag: MED297_14300
Name: prpF
Funciton: Aconitase accessory protein PrpF
prpR-prpB-prpC-acnD-prpF -77 4.9 ATTGTTAACAAT MED297_14280
-14 4.2 ATTGTTAACAAA
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