Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing rpmE2 gene

Properties
Regulog: Zur - Vibrionales
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Zinc homeostasis
Effector: Zinc ion, (Zn2+)
Phylum: Proteobacteria/gamma
Built upon 62 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Vibrio angustum S14
Position: -43
Score: 6.62971
Sequence: GTTATGTTATAACATAACAATAA
Locus tag: VAS14_13584
Name: rpmE2
Funciton: LSU ribosomal protein L31p
Locus tag: VAS14_13579
Name: rpmJ2
Funciton: LSU ribosomal protein L36p
rpmE2-rpmJ2 -43 6.6 GTTATGTTATAACATAACAATAA VAS14_13584
Vibrio cholerae O1 biovar eltor str. N16961
Position: -40
Score: 6.86119
Sequence: AAAATGTTATAACATAACAATTT
Locus tag: VC0878
Name: rpmE2
Funciton: LSU ribosomal protein L31p
Locus tag: VC0879
Name: rpmJ2
Funciton: LSU ribosomal protein L36p
rpmE2-rpmJ2 -40 6.9 AAAATGTTATAACATAACAATTT VC0878
Vibrio harveyi ATCC BAA-1116
Position: -41
Score: 6.57735
Sequence: ATAATGTTATAACATAACAATCA
Locus tag: VIBHAR_03250
Name: rpmE2
Funciton: LSU ribosomal protein L31p
Locus tag: VIBHAR_03249
Name: rpmJ2
Funciton: LSU ribosomal protein L36p
rpmE2-rpmJ2 -41 6.6 ATAATGTTATAACATAACAATCA VIBHAR_03250
Vibrio parahaemolyticus RIMD 2210633
Position: -41
Score: 6.86119
Sequence: AAAATGTTATAACATAACAATTT
Locus tag: VP2331
Name: rpmE2
Funciton: LSU ribosomal protein L31p
Locus tag: VP2330
Name: rpmJ2
Funciton: LSU ribosomal protein L36p
rpmE2-rpmJ2 -41 6.9 AAAATGTTATAACATAACAATTT VP2331
Vibrio salmonicida LFI1238
Position: -47
Score: 6.7011
Sequence: GTTATGTTATAACATAACAATTA
Locus tag: VSAL_I0890
Name: rpmE2
Funciton: LSU ribosomal protein L31p
Locus tag: VSAL_I0889
Name: rpmJ2
Funciton: LSU ribosomal protein L36p
rpmE2-rpmJ2 -47 6.7 GTTATGTTATAACATAACAATTA VSAL_I0890
Vibrio shilonii AK1
Position: -31
Score: 6.53457
Sequence: GCAATGTTATAACATAACAATTA
Locus tag: VSAK1_20814
Name: rpmE2
Funciton: LSU ribosomal protein L31p
Locus tag: VSAK1_20809
Name: rpmJ2
Funciton: LSU ribosomal protein L36p
rpmE2-rpmJ2 -31 6.5 GCAATGTTATAACATAACAATTA VSAK1_20814
Vibrio splendidus LGP32
Position: -43
Score: 5.60552
Sequence: GATATGTTATAACGTATCAAATT
Locus tag: VS_2366
Name: rpmE2
Funciton: LSU ribosomal protein L31p
rpmE2 -43 5.6 GATATGTTATAACGTATCAAATT VS_2366
Vibrio vulnificus CMCP6
Position: -37
Score: 6.68323
Sequence: AATATGTTATAACATAACAATTA
Locus tag: VV1_1840
Name: rpmE2
Funciton: LSU ribosomal protein L31p
rpmE2 -37 6.7 AATATGTTATAACATAACAATTA VV1_1840