Orthologous regulated operons containing ribE gene

Properties
Regulog:	RbkR - Thermococcales
Regulator type:	Transcription factor
Regulator family:	[Other]
Regulation mode:
Biological process:	Riboflavin biosynthesis
Effector:	Flavin mononucleotide
Phylum:	Euryarchaeota

Built upon 13 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Pyrococcus furiosus DSM 3638
Position: -56 Score: 4.92515 Sequence: CTGTCTTATTTTTGGAACAC Position: -23 Score: 4.56364 Sequence: TAGTTCTATACTTGAGACAT Locus tag: PF0064 Name: ribBA Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25) Locus tag: PF0063 Name: ribH Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) Locus tag: PF0062 Name: ribD Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) Locus tag: PF0061 Name: ribE Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
ribBA-ribH-ribD-ribE	-56	4.9	CTGTCTTATTTTTGGAACAC	PF0064
	-23	4.6	TAGTTCTATACTTGAGACAT
Thermococcus gammatolerans EJ3
Position: 92 Score: 6.00711 Sequence: ATGTTCCAAAAACGGAACAA Locus tag: TGAM_1254 Name: ribD Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) Locus tag: TGAM_1255 Name: ribE Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9) Locus tag: TGAM_1256 Name: ribBA Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25) Locus tag: TGAM_1257 Name: ribH Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
ribD-ribE-ribBA-ribH	92	6	ATGTTCCAAAAACGGAACAA	TGAM_1254
Thermococcus kodakaraensis KOD1
Position: -52 Score: 5.98256 Sequence: TTGTTCCAACCTTGGAACAA Locus tag: TK0424 Name: ribD Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) Locus tag: TK0425 Name: ribE Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
ribD-ribE	-52	6	TTGTTCCAACCTTGGAACAA	TK0424
Thermococcus onnurineus NA1
Position: -53 Score: 6.34218 Sequence: TTATTCCAATTTTGGAACAA Locus tag: TON_0610 Name: ribD Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) Locus tag: TON_0609 Name: ribE Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9) Locus tag: TON_0608 Name: ribBA Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25) Locus tag: TON_0607 Name: ribH Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
ribD-ribE-ribBA-ribH	-53	6.3	TTATTCCAATTTTGGAACAA	TON_0610