Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing metR gene

Properties
Regulog: MetR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: LysR
Regulation mode: activator (repressor)
Biological process: Methionine biosynthesis
Effector: Homocysteine
Phylum: Proteobacteria/Gamma
Built upon 117 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -141
Score: 4.3972
Sequence: ATGAGCACATTTCAA
Position: -48
Score: 4.08435
Sequence: ACGAATTGTGTTCAC
Position: -26
Score: 4.4897
Sequence: ATGAACAAACTTCAT
Locus tag: Sama_2628
Name: metR
Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
metR -141 4.4 ATGAGCACATTTCAA Sama_2628
-48 4.1 ACGAATTGTGTTCAC
-26 4.5 ATGAACAAACTTCAT
Shewanella baltica OS155
Position: -48
Score: 4.30796
Sequence: CCGAATTGATTTCAA
Position: -26
Score: 4.29767
Sequence: ATGAGCGAATTTCAC
Locus tag: Sbal_0666
Name: metR
Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
metR -48 4.3 CCGAATTGATTTCAA Sbal_0666
-26 4.3 ATGAGCGAATTTCAC
Shewanella denitrificans OS217
Position: -48
Score: 4.0853
Sequence: TGGAAATAAATTCAG
Position: -26
Score: 4.53168
Sequence: ATGAGTGAAACTCAT
Locus tag: Sden_0731
Name: metR
Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
metR -48 4.1 TGGAAATAAATTCAG Sden_0731
-26 4.5 ATGAGTGAAACTCAT
Shewanella frigidimarina NCIMB 400
Position: -48
Score: 4.58665
Sequence: TCGAATTGATTTCAT
Position: -26
Score: 4.27771
Sequence: TTGAGCAAGATTCAT
Locus tag: Sfri_0826
Name: metR
Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
metR -48 4.6 TCGAATTGATTTCAT Sfri_0826
-26 4.3 TTGAGCAAGATTCAT
Shewanella halifaxensis HAW-EB4
Position: -162
Score: 4.30566
Sequence: ATGAGCAAAATTCAG
Position: -48
Score: 4.28
Sequence: TCGAAACGAATTCAA
Locus tag: Shal_3283
Name: metR
Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
metR -162 4.3 ATGAGCAAAATTCAG Shal_3283
-48 4.3 TCGAAACGAATTCAA
Shewanella loihica PV-4
Position: -178
Score: 4.63162
Sequence: ATGAGAGAAATTCAT
Position: -48
Score: 4.3598
Sequence: TCGAATTGATTTCAC
Position: -26
Score: 4.59123
Sequence: ATGAGCCAAATTCAT
Locus tag: Shew_2987
Name: metR
Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
metR -178 4.6 ATGAGAGAAATTCAT Shew_2987
-48 4.4 TCGAATTGATTTCAC
-26 4.6 ATGAGCCAAATTCAT
Shewanella oneidensis MR-1
Position: -48
Score: 4.30796
Sequence: CCGAATTGATTTCAA
Position: -26
Score: 4.35037
Sequence: ATGAGCGAAATTCAC
Locus tag: SO0817
Name: metR
Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
metR -48 4.3 CCGAATTGATTTCAA SO0817
-26 4.4 ATGAGCGAAATTCAC
Shewanella pealeana ATCC 700345
Position: -154
Score: 4.16546
Sequence: ATGAGGAAAATTCAG
Position: -48
Score: 4.28
Sequence: TCGAAACGAATTCAA
Position: -26
Score: 4.52452
Sequence: ATGAGCGAATTTCAT
Locus tag: Spea_3203
Name: metR
Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
metR -154 4.2 ATGAGGAAAATTCAG Spea_3203
-48 4.3 TCGAAACGAATTCAA
-26 4.5 ATGAGCGAATTTCAT
Shewanella piezotolerans WP3
Position: -153
Score: 4.5654
Sequence: ATGAATAAAATTCAG
Position: -48
Score: 4.26383
Sequence: TAGAAATGAATTCAA
Position: -26
Score: 4.39145
Sequence: ATGAGAAAACTTCAT
Locus tag: swp_1138
Name: metR
Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
metR -153 4.6 ATGAATAAAATTCAG swp_1138
-48 4.3 TAGAAATGAATTCAA
-26 4.4 ATGAGAAAACTTCAT
Shewanella putrefaciens CN-32
Position: -48
Score: 4.30796
Sequence: CCGAATTGATTTCAA
Position: -26
Score: 4.35037
Sequence: ATGAGCGAAATTCAC
Locus tag: Sputcn32_3173
Name: metR
Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
metR -48 4.3 CCGAATTGATTTCAA Sputcn32_3173
-26 4.4 ATGAGCGAAATTCAC
Shewanella sediminis HAW-EB3
Position: -190
Score: 3.99059
Sequence: GTGAGCAGAATTCAG
Position: -59
Score: 4.58665
Sequence: ACGAATTGATTTCAA
Position: -37
Score: 4.737
Sequence: ATGAACAAAATTCAT
Locus tag: Ssed_3556
Name: metR
Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
metR -190 4 GTGAGCAGAATTCAG Ssed_3556
-59 4.6 ACGAATTGATTTCAA
-37 4.7 ATGAACAAAATTCAT
Shewanella sp ANA-3
Position: -48
Score: 4.30796
Sequence: CCGAATTGATTTCAA
Position: -26
Score: 4.35037
Sequence: ATGAGCGAAATTCAC
Locus tag: Shewana3_3470
Name: metR
Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
metR -48 4.3 CCGAATTGATTTCAA Shewana3_3470
-26 4.4 ATGAGCGAAATTCAC
Shewanella sp MR-4
Position: -48
Score: 4.30796
Sequence: CCGAATTGATTTCAA
Position: -26
Score: 4.35037
Sequence: ATGAGCGAAATTCAC
Locus tag: Shewmr4_3300
Name: metR
Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
metR -48 4.3 CCGAATTGATTTCAA Shewmr4_3300
-26 4.4 ATGAGCGAAATTCAC
Shewanella sp MR-7
Position: -48
Score: 4.30796
Sequence: CCGAATTGATTTCAA
Position: -26
Score: 4.35037
Sequence: ATGAGCGAAATTCAC
Locus tag: Shewmr7_0653
Name: metR
Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
metR -48 4.3 CCGAATTGATTTCAA Shewmr7_0653
-26 4.4 ATGAGCGAAATTCAC
Shewanella sp W3-18-1
Position: -48
Score: 4.30796
Sequence: CCGAATTGATTTCAA
Position: -26
Score: 4.45747
Sequence: ATGAGTGAAATTCAC
Locus tag: Sputw3181_0770
Name: metR
Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
metR -48 4.3 CCGAATTGATTTCAA Sputw3181_0770
-26 4.5 ATGAGTGAAATTCAC
Shewanella woodyi ATCC 51908
Position: -192
Score: 4.30566
Sequence: ATGAGCAAAATTCAG
Position: -59
Score: 3.78163
Sequence: GGGAATAGATTTCAA
Position: -37
Score: 4.53168
Sequence: ATGAGTGAAACTCAT
Locus tag: Swoo_3732
Name: metR
Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
metR -192 4.3 ATGAGCAAAATTCAG Swoo_3732
-59 3.8 GGGAATAGATTTCAA
-37 4.5 ATGAGTGAAACTCAT
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