Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing COG1189 gene

Properties
Regulator type: RNA regulatory element
Name: SAH_riboswitch
RFAM: RF01057
Regulation mode:
Biological process: Methionine metabolism
Effector: S-adenosylhomocysteine
Phylum: Proteobacteria/Beta
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Acidovorax avenae subsp. citrulli AAC00-1
Position: -165
Score: 42.53
Sequence: CCCTACCGAGGAGCG...
Locus tag: Aave_4060
Name: ahcY
Funciton: Adenosylhomocysteinase (EC 3.3.1.1)
Locus tag: Aave_4059
Name: COG1189
Funciton: S-adenosyl-L-methionine-dependent ribosomal RNA methyltransferase
Locus tag: Aave_4058
Name: metF
Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
ahcY-COG1189-metF -165 42.5 CCCTACCGAGGAGCG... Aave_4060
Acidovorax sp. JS42
Position: -147
Score: 60.01
Sequence: TTTCCGAGGAGCGTT...
Locus tag: Ajs_0618
Name: ahcY
Funciton: Adenosylhomocysteinase (EC 3.3.1.1)
Locus tag: Ajs_0619
Name: COG1189
Funciton: S-adenosyl-L-methionine-dependent ribosomal RNA methyltransferase
Locus tag: Ajs_0620
Name: metF
Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
ahcY-COG1189-metF -147 60 TTTCCGAGGAGCGTT... Ajs_0618
Comamonas testosteroni KF-1
Position: -171
Score: 45.25
Sequence: CATCCGAGGAGCGTT...
Locus tag: CtesDRAFT_4458
Name: ahcY
Funciton: Adenosylhomocysteinase (EC 3.3.1.1)
Locus tag: CtesDRAFT_4459
Name: COG1189
Funciton: S-adenosyl-L-methionine-dependent ribosomal RNA methyltransferase
Locus tag: CtesDRAFT_4460
Name: metF
Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
ahcY-COG1189-metF -171 45.2 CATCCGAGGAGCGTT... CtesDRAFT_4458
Delftia acidovorans SPH-1
Position: -156
Score: 52.24
Sequence: CCTCTCCGAGGAGCG...
Locus tag: Daci_5919
Name: ahcY
Funciton: Adenosylhomocysteinase (EC 3.3.1.1)
Locus tag: Daci_5918
Name: COG1189
Funciton: S-adenosyl-L-methionine-dependent ribosomal RNA methyltransferase
Locus tag: Daci_5917
Name: metF
Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
ahcY-COG1189-metF -156 52.2 CCTCTCCGAGGAGCG... Daci_5919
Leptothrix cholodnii SP-6
Position: -175
Score: 55.51
Sequence: CTGTTTCGAGGAGCG...
Locus tag: Lcho_0119
Name: ahcY
Funciton: Adenosylhomocysteinase (EC 3.3.1.1)
Locus tag: Lcho_0118
Name: COG1189
Funciton: S-adenosyl-L-methionine-dependent ribosomal RNA methyltransferase
Locus tag: Lcho_0117
Name: metF
Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
ahcY-COG1189-metF -175 55.5 CTGTTTCGAGGAGCG... Lcho_0119
Methylibium petroleiphilum PM1
Position: -148
Score: 63.09
Sequence: CTTTCGAGGAGCGTT...
Locus tag: Mpe_A3286
Name: ahcY
Funciton: Adenosylhomocysteinase (EC 3.3.1.1)
Locus tag: Mpe_A3287
Name: COG1189
Funciton: S-adenosyl-L-methionine-dependent ribosomal RNA methyltransferase
Locus tag: Mpe_A3288
Name: metF
Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
ahcY-COG1189-metF -148 63.1 CTTTCGAGGAGCGTT... Mpe_A3286
Polaromonas naphthalenivorans CJ2
Position: -176
Score: 50.19
Sequence: CTCCTGAGGAGCGTT...
Locus tag: Pnap_0489
Name: ahcY
Funciton: Adenosylhomocysteinase (EC 3.3.1.1)
Locus tag: Pnap_0490
Name: COG1189
Funciton: S-adenosyl-L-methionine-dependent ribosomal RNA methyltransferase
Locus tag: Pnap_0491
Name: metF
Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
ahcY-COG1189-metF -176 50.2 CTCCTGAGGAGCGTT... Pnap_0489
Polaromonas sp. JS666
Position: -173
Score: 52.7
Sequence: GCTTCCTGAGGAGCG...
Locus tag: Bpro_4132
Name: ahcY
Funciton: Adenosylhomocysteinase (EC 3.3.1.1)
Locus tag: Bpro_4131
Name: COG1189
Funciton: S-adenosyl-L-methionine-dependent ribosomal RNA methyltransferase
Locus tag: Bpro_4130
Name: metF
Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
ahcY-COG1189-metF -173 52.7 GCTTCCTGAGGAGCG... Bpro_4132
Rhodoferax ferrireducens DSM 15236
Position: -187
Score: 43.26
Sequence: TTTCCGAGGAGCGTT...
Locus tag: Rfer_0652
Name: ahcY
Funciton: Adenosylhomocysteinase (EC 3.3.1.1)
Locus tag: Rfer_0653
Name: COG1189
Funciton: S-adenosyl-L-methionine-dependent ribosomal RNA methyltransferase
Locus tag: Rfer_0654
Name: metF
Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
ahcY-COG1189-metF -187 43.3 TTTCCGAGGAGCGTT... Rfer_0652
Variovorax paradoxus S110
Position: -136
Score: 45.06
Sequence: CGGTTCCGAGGAGCG...
Locus tag: Vapar_4683
Name: ahcY
Funciton: Adenosylhomocysteinase (EC 3.3.1.1)
Locus tag: Vapar_4682
Name: COG1189
Funciton: S-adenosyl-L-methionine-dependent ribosomal RNA methyltransferase
Locus tag: Vapar_4681
Name: metF
Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
ahcY-COG1189-metF -136 45.1 CGGTTCCGAGGAGCG... Vapar_4683
Verminephrobacter eiseniae EF01-2
Position: -155
Score: 46.24
Sequence: GCTCCGAGGAGCGTT...
Locus tag: Veis_0656
Name: ahcY
Funciton: Adenosylhomocysteinase (EC 3.3.1.1)
Locus tag: Veis_0655
Name: COG1189
Funciton: S-adenosyl-L-methionine-dependent ribosomal RNA methyltransferase
Locus tag: Veis_0654
Name: metF
Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
ahcY-COG1189-metF -155 46.2 GCTCCGAGGAGCGTT... Veis_0656
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