Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing amtB gene

Properties
Regulog: NtrC - Sphingomonadales
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator (repressor)
Biological process: Nitrogen assimilation
Effector: Phosphorylated NtrB, signal histidine kinase
Phylum: Proteobacteria/alpha
Built upon 25 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Erythrobacter litoralis HTCC2594
Position: -152
Score: 4.67588
Sequence: TGACTAAAAATTAGGCC
Position: -134
Score: 4.82405
Sequence: TGCGTATTCTTTGGGCA
Locus tag: ELI_13865
Name: glnK
Funciton: Nitrogen regulatory protein P-II
Locus tag: ELI_13870
Name: amtB
Funciton: Ammonium transporter
glnK-amtB -152 4.7 TGACTAAAAATTAGGCC ELI_13865
-134 4.8 TGCGTATTCTTTGGGCA
Erythrobacter sp. NAP1
Position: -164
Score: 4.63952
Sequence: TGCTCAAAAAATAAACA
Position: -145
Score: 4.20443
Sequence: TGATTAAACCTTAGGCA
Locus tag: NAP1_12238
Name: glnK
Funciton: Nitrogen regulatory protein P-II
Locus tag: NAP1_12233
Name: amtB
Funciton: Ammonium transporter
glnK-amtB -164 4.6 TGCTCAAAAAATAAACA NAP1_12238
-145 4.2 TGATTAAACCTTAGGCA
Novosphingobium aromaticivorans DSM 12444
Position: -207
Score: 3.65002
Sequence: TGCCCGGAAACGAAGCA
Position: -182
Score: 5.75215
Sequence: TGCTTAAAATTTAGGCA
Locus tag: Saro_0693
Name: glnK
Funciton: Nitrogen regulatory protein P-II
Locus tag: Saro_0694
Name: amtB
Funciton: Ammonium transporter
glnK-amtB -207 3.7 TGCCCGGAAACGAAGCA Saro_0693
-182 5.8 TGCTTAAAATTTAGGCA
Sphingobium japonicum UT26S
Position: -150
Score: 5.57124
Sequence: TGCCTAATTTTTGAGCA
Position: -121
Score: 4.34492
Sequence: TGCCCATTTTTTCAGCG
Locus tag: SJA_C1-01910
Name: glnK
Funciton: Nitrogen regulatory protein P-II
Locus tag: SJA_C1-01900
Name: amtB
Funciton: Ammonium transporter
glnK-amtB -150 5.6 TGCCTAATTTTTGAGCA SJA_C1-01910
-121 4.3 TGCCCATTTTTTCAGCG
Sphingomonas wittichii RW1
Position: -159
Score: 5.36085
Sequence: TGCCTAAAAAACGGGCA
Position: -141
Score: 3.98131
Sequence: GGCTCAACTTTTAGACA
Locus tag: Swit_1918
Name: glnK
Funciton: Nitrogen regulatory protein P-II
Locus tag: Swit_1917
Name: amtB
Funciton: Ammonium transporter
glnK-amtB -159 5.4 TGCCTAAAAAACGGGCA Swit_1918
-141 4 GGCTCAACTTTTAGACA
Sphingopyxis alaskensis RB2256
Position: -163
Score: 5.83403
Sequence: TGCCCAAAAATTAGGCA
Locus tag: Sala_2326
Name: glnK
Funciton: Nitrogen regulatory protein P-II
Locus tag: Sala_2327
Name: amtB
Funciton: Ammonium transporter
glnK-amtB -163 5.8 TGCCCAAAAATTAGGCA Sala_2326
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