Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ntrC gene

Properties
Regulog: NtrC - Burkholderia
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator (repressor)
Biological process: Nitrogen assimilation
Effector: Phosphorylated NtrB, signal histidine kinase
Phylum: Proteobacteria/beta
Built upon 27 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Burkholderia cepacia AMMD
Position: -242
Score: 5.14942
Sequence: TGCACCATTTCAGTGCG
Locus tag: Bamb_2186
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
Locus tag: Bamb_2185
Name: ntrB
Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-)
Locus tag: Bamb_2184
Name: ntrC
Funciton: Nitrogen regulation protein NR(I), Fis family
glnA-ntrB-ntrC -242 5.1 TGCACCATTTCAGTGCG Bamb_2186
Burkholderia glumae BGR1
Position: -315
Score: 4.59026
Sequence: ATCACCAAAATGGTGCG
Position: -275
Score: 4.79019
Sequence: CGCATTGATTTGGTGCG
Locus tag: bglu_1g25000
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
Locus tag: bglu_1g24990
Name: ntrB
Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-)
Locus tag: bglu_1g24980
Name: ntrC
Funciton: Nitrogen regulation protein NR(I), Fis family
glnA-ntrB-ntrC -315 4.6 ATCACCAAAATGGTGCG bglu_1g25000
-275 4.8 CGCATTGATTTGGTGCG
Burkholderia mallei ATCC 23344
Position: -312
Score: 4.73355
Sequence: CGCACTAAAGCGGTGCA
Position: -283
Score: 4.947
Sequence: AGCACCAAATTAGTGTT
Locus tag: BMA1743
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
Locus tag: BMA1742
Name: ISBma2
Funciton: Transposase, IS4
Locus tag: BMA1741
Name: ntrB
Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-)
Locus tag: BMA1740
Name: ntrC
Funciton: Nitrogen regulation protein NR(I), Fis family
glnA-ISBma2-ntrB-ntrC -312 4.7 CGCACTAAAGCGGTGCA BMA1743
-283 4.9 AGCACCAAATTAGTGTT
Burkholderia phymatum STM815
Position: -273
Score: 4.39007
Sequence: TGCCCTGTGATGGTGCA
Locus tag: Bphy_1481
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
Locus tag: Bphy_1480
Name: ntrB
Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-)
Locus tag: Bphy_1479
Name: ntrC
Funciton: Nitrogen regulation protein NR(I), Fis family
glnA-ntrB-ntrC -273 4.4 TGCCCTGTGATGGTGCA Bphy_1481
Burkholderia pseudomallei K96243
Position: -312
Score: 4.73355
Sequence: CGCACTAAAGCGGTGCA
Position: -283
Score: 5.00357
Sequence: AGCACCAAATTGGTGTT
Locus tag: BPSL2318
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
Locus tag: BPSL2317
Name: ntrB
Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-)
Locus tag: BPSL2316
Name: ntrC
Funciton: Nitrogen regulation protein NR(I), Fis family
glnA-ntrB-ntrC -312 4.7 CGCACTAAAGCGGTGCA BPSL2318
-283 5 AGCACCAAATTGGTGTT
Burkholderia sp. 383
Position: -242
Score: 4.20337
Sequence: TGCACCAGCGCGGTGCC
Locus tag: Bcep18194_A5458
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
Locus tag: Bcep18194_A5457
Name: ntrB
Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-)
Locus tag: Bcep18194_A5456
Name: ntrC
Funciton: Nitrogen regulation protein NR(I), Fis family
glnA-ntrB-ntrC -242 4.2 TGCACCAGCGCGGTGCC Bcep18194_A5458
Burkholderia vietnamiensis G4
Position: -282
Score: 4.83297
Sequence: TGCACCGAATCGGCGCT
Locus tag: Bcep1808_2228
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
Locus tag: Bcep1808_2227
Name: ntrB
Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-)
Locus tag: Bcep1808_2226
Name: ntrC
Funciton: Nitrogen regulation protein NR(I), Fis family
glnA-ntrB-ntrC -282 4.8 TGCACCGAATCGGCGCT Bcep1808_2228
Burkholderia xenovorans LB400
Position: -266
Score: 4.86085
Sequence: TGCACAAATCTGGTGCG
Locus tag: Bxe_A1522
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
Locus tag: Bxe_A1523
Name: ntrB
Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-)
Locus tag: Bxe_A1524
Name: ntrC
Funciton: Nitrogen regulation protein NR(I), Fis family
glnA-ntrB-ntrC -266 4.9 TGCACAAATCTGGTGCG Bxe_A1522
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