Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ykoF gene

Properties
Regulator type: RNA regulatory element
Name: TPP
RFAM: RF00059
Regulation mode:
Biological process: Thiamine biosynthesis
Effector: Thiamine pyrophosphate
Phylum: Proteobacteria
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Oceanicola granulosus HTCC2516
Position: -99
Score: 65.58
Sequence: CGAACATAACCGGGG...
Locus tag: OG2516_13249
Name: ykoF
Funciton: Additional substrate-binding component of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: OG2516_13244
Name: thiX2
Funciton: Hydroxymethylpyrimidine ABC transporter, transmembrane component
Locus tag: OG2516_13239
Name: thiZ2
Funciton: Hydroxymethylpyrimidine ABC transporter, ATPase component
Locus tag: OG2516_13234
Name: thiY2
Funciton: Hydroxymethylpyrimidine ABC transporter, substrate-binding component
ykoF-thiX2-thiZ2-thiY2 -99 65.6 CGAACATAACCGGGG... OG2516_13249
Rhodobacterales bacterium HTCC2654
Position: -100
Score: 68.06
Sequence: CACATAACCAGGGGT...
Locus tag: RB2654_21928
Name: ykoF
Funciton: Additional substrate-binding component of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: RB2654_21933
Name: thiX2
Funciton: Hydroxymethylpyrimidine ABC transporter, transmembrane component
Locus tag: RB2654_21938
Name: thiZ2
Funciton: Hydroxymethylpyrimidine ABC transporter, ATPase component
Locus tag: RB2654_21943
Name: thiY2
Funciton: Hydroxymethylpyrimidine ABC transporter, substrate-binding component
ykoF-thiX2-thiZ2-thiY2 -100 68.1 CACATAACCAGGGGT... RB2654_21928