Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing thiC gene

Properties
Regulator type: RNA regulatory element
Name: TPP
RFAM: RF00059
Regulation mode:
Biological process: Thiamine biosynthesis
Effector: Thiamine pyrophosphate
Phylum: Proteobacteria
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Hyphomonas neptunium ATCC 15444
Position: -93
Score: 63.49
Sequence: GCATATCCGAGGGGT...
Locus tag: HNE_3337
Name: PF08818
Funciton: Protein of unknown function DUF1801
Locus tag: HNE_3338
Name: thiC
Funciton: Thiamin biosynthesis protein ThiC
PF08818-thiC -93 63.5 GCATATCCGAGGGGT... HNE_3337
Oceanicaulis alexandrii HTCC2633
Position: -101
Score: 50.05
Sequence: CGTCAGTTCCAAGGG...
Locus tag: OA2633_07209
Name: PF04237
Funciton: Protein of unknown function DUF419
Locus tag: OA2633_07204
Name: thiC
Funciton: Thiamin biosynthesis protein ThiC
PF04237-thiC -101 50 CGTCAGTTCCAAGGG... OA2633_07209
Oceanicola batsensis HTCC2597
Position: -260
Score: 67.3
Sequence: GCACTCACCCGGGGG...
Locus tag: OB2597_18012
Name: thiC
Funciton: Thiamin biosynthesis protein ThiC
Locus tag: OB2597_18017
Name: thiM
Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: OB2597_18022
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
thiC-thiM-thiE -260 67.3 GCACTCACCCGGGGG... OB2597_18012
Paracoccus denitrificans PD1222
Position: -253
Score: 50.95
Sequence: CCTCACGTCAGGGGA...
Locus tag: Pden_2944
Name: thiC
Funciton: Thiamin biosynthesis protein ThiC
thiC -253 51 CCTCACGTCAGGGGA... Pden_2944
Roseobacter sp. MED193
Position: -246
Score: 49.92
Sequence: TAGCCTACGCAGGGG...
Locus tag: MED193_07728
Name: thiC
Funciton: Thiamin biosynthesis protein ThiC
Locus tag: MED193_07733
Name: thiO
Funciton: Glycine oxidase ThiO (EC 1.4.3.19)
Locus tag: MED193_07738
Name: thiS
Funciton: Sulfur carrier protein ThiS
Locus tag: MED193_07743
Name: thiG
Funciton: Thiazole biosynthesis protein ThiG
Locus tag: MED193_07748
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: MED193_07753
Name: thiF
Funciton: Thiamine biosynthesis protein ThiF
Locus tag: MED193_07758
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
thiC-thiO-thiS-thiG-thiE-thiF-thiD -246 49.9 TAGCCTACGCAGGGG... MED193_07728
Roseovarius nubinhibens ISM
Position: -223
Score: 52.15
Sequence: ATTGCACGCAGGGGG...
Locus tag: ISM_10621
Name: thiC
Funciton: Thiamin biosynthesis protein ThiC
Locus tag: ISM_10626
Name: thiO
Funciton: Glycine oxidase ThiO (EC 1.4.3.19)
Locus tag: ISM_10631
Name: thiS
Funciton: Sulfur carrier protein ThiS
Locus tag: ISM_10636
Name: thiG
Funciton: Thiazole biosynthesis protein ThiG
Locus tag: ISM_10641
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: ISM_10646
Name: thiF
Funciton: Thiamine biosynthesis protein ThiF
Locus tag: ISM_10651
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
thiC-thiO-thiS-thiG-thiE-thiF-thiD -223 52.2 ATTGCACGCAGGGGG... ISM_10621
Roseovarius sp. 217
Position: -236
Score: 56.6
Sequence: AAGAGGGACGCAGGG...
Locus tag: ROS217_02430
Name: thiC
Funciton: Thiamin biosynthesis protein ThiC
thiC -236 56.6 AAGAGGGACGCAGGG... ROS217_02430
Silicibacter TM1040
Position: -242
Score: 48.23
Sequence: GCAGCACGCAGGGGA...
Locus tag: TM1040_2054
Name: thiC
Funciton: Thiamin biosynthesis protein ThiC
thiC -242 48.2 GCAGCACGCAGGGGA... TM1040_2054
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