Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing nikB gene

Properties
Regulog: Fnr - Enterobacteriales
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator (repressor)
Biological process: Energy metabolism; Anaerobic metabolism
Effector: Oxygen
Phylum: Gammaproteobacteria
Built upon 685 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Citrobacter koseri ATCC BAA-895
Position: -228
Score: 3.84
Sequence: TTGATCCAGAACAC
Locus tag: CKO_04926
Name: nikA
Funciton: Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3)
Locus tag: CKO_04927
Name: nikB
Funciton: Nickel transport system permease protein NikB (TC 3.A.1.5.3)
Locus tag: CKO_04928
Name: nikC
Funciton: Nickel transport system permease protein NikC (TC 3.A.1.5.3)
Locus tag: CKO_04929
Name: nikD
Funciton: Nickel transport ATP-binding protein NikD (TC 3.A.1.5.3)
Locus tag: CKO_04930
Name: nikE
Funciton: Nickel transport ATP-binding protein NikE (TC 3.A.1.5.3)
Locus tag: CKO_04931
Name: nikR
Funciton: Nickel responsive regulator NikR
nikA-nikB-nikC-nikD-nikE-nikR -228 3.8 TTGATCCAGAACAC CKO_04926
Edwardsiella tarda EIB202
Position: -80
Score: 3.38
Sequence: TTGATCCATCACAC
Locus tag: ETAE_1379
Name: nikA
Funciton: Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3)
Locus tag: ETAE_1378
Name: nikB
Funciton: Nickel transport system permease protein NikB (TC 3.A.1.5.3)
Locus tag: ETAE_1377
Name: nikC
Funciton: Nickel transport system permease protein NikC (TC 3.A.1.5.3)
Locus tag: ETAE_1376
Name: nikD
Funciton: Nickel transport ATP-binding protein NikD (TC 3.A.1.5.3)
Locus tag: ETAE_1375
Name: nikE
Funciton: Nickel transport ATP-binding protein NikE (TC 3.A.1.5.3)
nikA-nikB-nikC-nikD-nikE -80 3.4 TTGATCCATCACAC ETAE_1379
Enterobacter sp. 638
Position: -85
Score: 3.48
Sequence: TTGATCCAGCACAG
Locus tag: Ent638_1834
Name: nikA
Funciton: Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3)
Locus tag: Ent638_1835
Name: nikB
Funciton: Nickel transport system permease protein NikB (TC 3.A.1.5.3)
Locus tag: Ent638_1836
Name: nikC
Funciton: Nickel transport system permease protein NikC (TC 3.A.1.5.3)
Locus tag: Ent638_1837
Name: nikD
Funciton: Nickel transport ATP-binding protein NikD (TC 3.A.1.5.3)
Locus tag: Ent638_1838
Name: nikE
Funciton: Nickel transport ATP-binding protein NikE (TC 3.A.1.5.3)
Locus tag: Ent638_1839
Name: nikR
Funciton: Nickel responsive regulator NikR
nikA-nikB-nikC-nikD-nikE-nikR -85 3.5 TTGATCCAGCACAG Ent638_1834
Escherichia coli str. K-12 substr. MG1655
Position: -86
Score: 4.0
Sequence: TTGATCCAGAACAG
Locus tag: b3476
Name: nikA
Funciton: Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3)
Locus tag: b3477
Name: nikB
Funciton: Nickel transport system permease protein NikB (TC 3.A.1.5.3)
Locus tag: b3478
Name: nikC
Funciton: Nickel transport system permease protein NikC (TC 3.A.1.5.3)
Locus tag: b3479
Name: nikD
Funciton: Nickel transport ATP-binding protein NikD (TC 3.A.1.5.3)
Locus tag: b3480
Name: nikE
Funciton: Nickel transport ATP-binding protein NikE (TC 3.A.1.5.3)
Locus tag: b3481
Name: nikR
Funciton: Nickel responsive regulator NikR
nikA-nikB-nikC-nikD-nikE-nikR -86 4 TTGATCCAGAACAG b3476
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Position: -6
Score: 4.03
Sequence: TTGATTATGCACAA
Locus tag: KPN_03849
Name: ECA0068
Funciton: Transcriptional regulator, LysR family
Locus tag: KPN_03850
Name: nikA
Funciton: Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3)
Locus tag: KPN_03851
Name: nikB
Funciton: Nickel transport system permease protein NikB (TC 3.A.1.5.3)
Locus tag: KPN_03852
Name: nikC
Funciton: Nickel transport system permease protein NikC (TC 3.A.1.5.3)
Locus tag: KPN_03853
Name: nikD
Funciton: Nickel transport ATP-binding protein NikD (TC 3.A.1.5.3)
Locus tag: KPN_03854
Name: nikE
Funciton: Nickel transport ATP-binding protein NikE (TC 3.A.1.5.3)
Locus tag: KPN_03855
Name: nikR
Funciton: Nickel responsive regulator NikR
ECA0068-nikA-nikB-nikC-nikD-nikE-nikR -6 4 TTGATTATGCACAA KPN_03849