Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing paaJ gene

Properties
Regulog: PaaR - Actinobacteria
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Phenylacetic acid degradation
Effector: Phenylacetyl-CoA
Phylum: Actinobacteria
Built upon 85 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Arthrobacter chlorophenolicus A6
Position: -83
Score: 6.06424
Sequence: ACAGAACGAACGGTCGGTAAGT
Locus tag: Achl_3063
Name: paaJ
Funciton: Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)
Locus tag: Achl_3062
Name: paaF
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
Locus tag: Achl_3061
Name: paaH
Funciton: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
paaJ-paaF-paaH -83 6.1 ACAGAACGAACGGTCGGTAAGT Achl_3063
Arthrobacter sp. FB24
Position: -83
Score: 5.38954
Sequence: ATAGAACGAACGGTCGGTAAAT
Locus tag: Arth_3268
Name: paaJ
Funciton: Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)
Locus tag: Arth_3267
Name: paaF
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
Locus tag: Arth_3266
Name: paaH
Funciton: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
paaJ-paaF-paaH -83 5.4 ATAGAACGAACGGTCGGTAAAT Arth_3268
Brevibacterium linens BL2
Position: -105
Score: 4.50547
Sequence: CAATACAGAACAAATGGTCAGT
Locus tag: BlinB01000722
Name: paaA
Funciton: Phenylacetate-CoA oxygenase, PaaA subunit
Locus tag: BlinB01000723
Name: paaB
Funciton: Phenylacetate-CoA oxygenase, PaaB subunit
Locus tag: BlinB01000724
Name: paaC
Funciton: Phenylacetate-CoA oxygenase, PaaC subunit
Locus tag: BlinB01000725
Name: paaD
Funciton: Phenylacetate-CoA oxygenase, PaaD subunit
Locus tag: BlinB01000726
Name: paaE
Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)
Locus tag: BlinB01000727
Name: paaJ
Funciton: Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)
Locus tag: BlinB01000728
Name: paaF
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
Locus tag: BlinB01000729
Name: paaH
Funciton: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
Locus tag: BlinB01000730
Name: paaG
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
paaA-paaB-paaC-paaD-paaE-paaJ-paaF-paaH-paaG -105 4.5 CAATACAGAACAAATGGTCAGT BlinB01000722
Corynebacterium efficiens YS-314
Position: -128
Score: 6.07241
Sequence: ACTGACCGGGCGGTCGGTTAGT
Locus tag: CE0667
Name: paaA
Funciton: Phenylacetate-CoA oxygenase, PaaA subunit
Locus tag: CE0668
Name: paaB
Funciton: Phenylacetate-CoA oxygenase, PaaB subunit
Locus tag: CE0669
Name: paaC
Funciton: Phenylacetate-CoA oxygenase, PaaC subunit
Locus tag: CE0670
Name: paaD
Funciton: Phenylacetate-CoA oxygenase, PaaD subunit
Locus tag: CE0671
Name: paaE
Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)
Locus tag: CE0672
Name: paaG
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
Locus tag: CE0673
Name: paaJ
Funciton: Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)
Locus tag: CE0674
Name: paaF
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
Locus tag: CE0675
Name: paaH
Funciton: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
paaA-paaB-paaC-paaD-paaE-paaG-paaJ-paaF-paaH -128 6.1 ACTGACCGGGCGGTCGGTTAGT CE0667
Kocuria rhizophila DC2201
Position: -85
Score: 4.76001
Sequence: ACGTCAAGACCAATCGGTCGGT
Locus tag: KRH_02310
Name: paaT
Funciton: Predicted phylacetic acid transporter PaaT
Locus tag: KRH_02300
Name: paaJ
Funciton: Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)
Locus tag: KRH_02290
Name: paaF
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
Locus tag: KRH_02280
Name: paaH
Funciton: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
paaT-paaJ-paaF-paaH -85 4.8 ACGTCAAGACCAATCGGTCGGT KRH_02310
Mycobacterium abscessus ATCC 19977
Position: -44
Score: 6.19901
Sequence: ACCGACCGAACGATCGGTTATT
Locus tag: MAB_0902
Name: paaJ
Funciton: Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)
Locus tag: MAB_0903
Name: paaF
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
Locus tag: MAB_0904
Name: paaH
Funciton: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
Locus tag: MAB_0905
Name: paaG
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
paaJ-paaF-paaH-paaG -44 6.2 ACCGACCGAACGATCGGTTATT MAB_0902
Nocardia farcinica IFM 10152
Position: -49
Score: 5.81919
Sequence: ACTGACCGAATGTTCGGTAATA
Locus tag: nfa21570
Name: paaJ
Funciton: Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)
Locus tag: nfa21580
Name: paaF
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
Locus tag: nfa21590
Name: paaH
Funciton: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
Locus tag: nfa21600
Name: paaG
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
Locus tag: nfa21610
Name: paaA
Funciton: Phenylacetate-CoA oxygenase, PaaA subunit
Locus tag: nfa21620
Name: paaB
Funciton: Phenylacetate-CoA oxygenase, PaaB subunit
Locus tag: nfa21630
Name: paaC
Funciton: Phenylacetate-CoA oxygenase, PaaC subunit
Locus tag: nfa21640
Name: paaD
Funciton: Phenylacetate-CoA oxygenase, PaaD subunit
Locus tag: nfa21650
Name: paaE
Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)
Locus tag: nfa21660
Name: paaK
Funciton: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)
paaJ-paaF-paaH-paaG-paaA-paaB-paaC-paaD-paaE-paaK -49 5.8 ACTGACCGAATGTTCGGTAATA nfa21570
Rhodococcus opacus B4
Position: -148
Score: 5.14428
Sequence: TTTCACCGTACGTTCGGTCGGT
Position: -53
Score: 5.33985
Sequence: ACCGACCGAAGATTCGGTTATT
Locus tag: ROP_25860
Name: paaJ
Funciton: Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)
Locus tag: ROP_25850
Name: paaF
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
Locus tag: ROP_25840
Name: paaH
Funciton: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
Locus tag: ROP_25830
Name: paaG
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
paaJ-paaF-paaH-paaG -148 5.1 TTTCACCGTACGTTCGGTCGGT ROP_25860
-53 5.3 ACCGACCGAAGATTCGGTTATT
Rhodococcus sp. RHA1
Position: -149
Score: 5.14428
Sequence: TTTCACCGTACGTTCGGTCGGT
Position: -53
Score: 5.33985
Sequence: ACCGACCGAAGATTCGGTTATT
Locus tag: RHA1_ro02863
Name: paaJ
Funciton: Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)
Locus tag: RHA1_ro02862
Name: paaF
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
Locus tag: RHA1_ro02861
Name: paaH
Funciton: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
Locus tag: RHA1_ro02860
Name: paaG
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
paaJ-paaF-paaH-paaG -149 5.1 TTTCACCGTACGTTCGGTCGGT RHA1_ro02863
-53 5.3 ACCGACCGAAGATTCGGTTATT
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