Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Profile of regulator BioQ in Actinomycetales

Properties
Regulator family: TetR
Regulation mode: repressor
Biological process: Biotin biosynthesis
Effector: Biotin
Regulog: BioQ - Actinomycetales
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Leifsonia xyli subsp. xyli str. CTCB07
Lxx20890 bioQ -43 5.2 ACTGAACGGTGTTCACC
Lxx20890 bioQ -28 5.5 CCTGAACAGCGTTCACT
Lxx20880 bioY -44 5.5 AGTGAACGCTGTTCAGG
Lxx20880 bioY -29 5.2 GGTGAACACCGTTCAGT
Kocuria rhizophila DC2201
KRH_02440 bioB -26 5.9 CCTGAACACCGTTCAAT
KRH_02440 bioB -8 5.6 ATTGAACAATGTTCAAG
KRH_02430 bioQ -271 5.6 CTTGAACATTGTTCAAT
KRH_02430 bioQ -253 5.9 ATTGAACGGTGTTCAGG
Brevibacterium linens BL2
BlinB01003681 bioB -23 6 CCTGAACAGTGTTCAAT
BlinB01003562 bioB2 -68 6 ATTGAACACTGTTCAGG
BlinB01002267 bioY -21 5.8 CCTGAACAGTGTTCAGT
Clavibacter michiganensis subsp. michiganensis NCPPB 382
CMM_1624 bioQ -47 4.7 CCTGAACGATGTTCACC
CMM_1624 bioQ -32 5.4 CCTGAACGGCGTTCACT
CMM_1625 bioY -65 5.4 AGTGAACGCCGTTCAGG
CMM_1625 bioY -50 4.7 GGTGAACATCGTTCAGG
Mycobacterium vanbaalenii PYR-1
Mvan_2793 bioB -62 5.9 CCTGAACGGTGTTCAAT
Mvan_2789 bioF -109 5.4 CCTGAACGGTGTTTAAT
Mvan_2792 bioQ -30 5.9 ATTGAACACCGTTCAGG
Rhodococcus opacus B4
ROP_07700 bioB -88 5.3 CGTGAACACCGTTCAAC
ROP_07700 bioB -72 5.4 CTTGTACGGTGTTCAAT
ROP_07830 bioA -41 5.7 CTTGAACGGTGTTCAAC
ROP_07820 bioF -24 5.7 GTTGAACACCGTTCAAG
ROP_07710 bioQ -99 5.4 ATTGAACACCGTACAAG
ROP_07710 bioQ -83 5.3 GTTGAACGGTGTTCACG
ROP_52960 bioY -38 5.4 CTTGAACGTCGTTCAAG
ROP_53000 bioY -38 5.4 CTTGAACGTCGTTCAAG
Rhodococcus erythropolis PR4
RER_34880 bioB -58 5.3 CGTGAACACCGTTCAAC
RER_34880 bioB -42 5.4 CTTGTACGGTGTTCAAT
RER_35050 bioA -37 5.7 CTTGAACACCGTTCAAC
RER_35040 bioF -18 5.7 GTTGAACGGTGTTCAAG
RER_34890 bioQ -124 5.4 ATTGAACACCGTACAAG
RER_34890 bioQ -108 5.3 GTTGAACGGTGTTCACG
Corynebacterium kroppenstedtii DSM 44385
ckrop_0784 bioB -87 6 ATTGAACAGTGTTCAGG
ckrop_0861 bioA -29 5.8 ACTGAACACTGTTCAGT
Corynebacterium jeikeium K411
jk0682 bioB -76 5.4 ACTAAACAGCGTTCAAG
jk1118 bioY -39 6.1 ATTGAACAGTGTTCAAG
Corynebacterium aurimucosum ATCC 700975
cauri_0069 bioB -30 6 CTTGAACGGTGTTCAAG
cauri_1503 bioY 3 5.6 CTTGAACAGTGTTCAAA
Corynebacterium amycolatum SK46
CORAM0001_1066 bioB -107 4.6 ATTGAACCCTGTTCGAC
CORAM0001_1898 bioA -50 4.7 CCCGAACGTCGTTCAAG
CORAM0001_0217 bioWF -47 5.5 CTTGAACAGTGTTAAAG
CORAM0001_0836 bioY -30 5 CCTGAACAGTGCTCAAC
Mycobacterium sp. JLS
Mjls_3090 bioB -110 5.9 CCTGAACGGTGTTCAAT
Mjls_3094 bioF -43 5.9 CCTGAACGGTGTTCAAT
Mjls_3091 bioQ -30 5.9 ATTGAACACCGTTCAGG
Propionibacterium acnes KPA171202
PPA1407 bioB 9 5 ATTGAATCCCGTTCAAT
PPA1407 bioB 26 5.6 CCTGAACGGCGTTCAGG
PPA0967 bioA -121 6 CCTGAACACTGTTCAAG
PPA1866 bioWF -50 5.5 ATTGAATGGTGTTCAAT
PPA1406 bioQ -55 5.6 CCTGAACGCCGTTCAGG
PPA1406 bioQ -38 5 ATTGAACGGGATTCAAT
PPA1400 bioY -75 5.9 ACTGAACGGTGTTCAAT
Corynebacterium glutamicum ATCC 13032
cg0095 bioB -156 5.1 TTTGAACAGTGTTCAAA
cg0095 bioB -135 6.1 CTTGAACACTGTTCAAG
cg2885 bioA -65 6.1 ATTGAACACTGTTCAAT
cg2147 bioY -63 5 CATGAACGCTGTTCAAA
cg2147 bioY -31 5.6 GTTGAACACTGTTCAGG
Corynebacterium diphtheriae NCTC 13129
DIP1124 bioB -24 5.4 ATTGAAAGGTGTTCAAT
DIP1124 bioB 11 5.4 ATTGAACACAGTTCAGG
DIP0105 bioB2 -15 5.6 ATTAAACACCGTTCAAT
DIP1191 bioA -103 6 ATTGAACGCTGTTCAAT
DIP1191 bioA -26 5.6 ATTAAACGGTGTTCAAT
DIP1381 bioW -20 5.4 ATTGAACACTGTTTAAC
Mycobacterium smegmatis str. MC2 155
MSMEG_3194 bioB -52 5.9 CCTGAACACCGTTCAAG
MSMEG_3194 bioB -32 5.4 CCTGAACACCGTTCAGC
MSMEG_3189 bioF -133 5.9 CCTGAACGGTGTTCAAT
MSMEG_3193 bioQ -50 5.4 GCTGAACGGTGTTCAGG
MSMEG_3193 bioQ -30 5.9 CTTGAACGGTGTTCAGG
Nocardia farcinica IFM 10152
nfa18320 bioB -85 5.9 CCTGAACACCGTTCAAG
nfa18180 bioA -60 6.1 CTTGAACACTGTTCAAG
nfa18190 bioF -31 5.9 CCTGAACGGTGTTCAAG
nfa18310 bioQ -65 5.9 CTTGAACGGTGTTCAGG
Corynebacterium efficiens YS-314
CE0089 bioB -38 6.1 ATTGAACACTGTTCAAT
CE1421 bioA -303 5.7 GTTGAACGGTGTTCAAT
CE1421 bioA -224 6.1 ATTGAACACTGTTCAAT
CE1851 bioY -30 4.6 GTTTAACACCGTTCAAA
CE1851 bioY 2 5.6 GTTGAACGGTGTTCAGT
Nocardioides sp. JS614
Noca_3415 bioB -96 5.2 CCTGAACGCTGTTCACC
Noca_3415 bioB -81 5.2 CCTGAACGCTGTTCACC
Noca_3415 bioB -66 5.2 CCTGAACGCTGTTCACC
Noca_3415 bioB -51 5.2 CCTGAACGCTGTTCACC
Noca_3415 bioB -36 5.7 CCTGAACGCTGTTCAGG
Noca_3348 bioQ -95 5.1 CCTGAACGGTGGTCAGG
Noca_3348 bioQ -80 5.2 GGTGAACGGTGTTCAGG
Noca_3349 bioY -54 5.2 CCTGAACACCGTTCACC
Noca_3349 bioY -39 5.1 CCTGACCACCGTTCAGG
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