Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Profile of regulator RbkR in Thermoproteales

Properties
Regulator family: [Other]
Regulation mode:
Biological process: Riboflavin biosynthesis
Effector: Flavin mononucleotide
Regulog: RbkR - Thermoproteales
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Pyrobaculum aerophilum str. IM2
PAE2986 ribB -18 4.4 TAGAAAATTAAGTTTACC
PAE2983 arfB -82 3.7 AGTCAACAACAGTGTGTA
PAE2986 ribB -51 4.3 AGTGTAAAAAAGTTGACA
PAE2983 arfB -49 5.5 TGTAAACATCAGTTGACT
PAE2984 arfA -22 3.7 TACACACTGTTGTTGACT
PAE2984 arfA -55 5.5 AGTCAACTGATGTTTACA
Pyrobaculum arsenaticum DSM 13514
Pars_1353 ribB -36 3.7 AGAAAAAAAGAGTTAACC
Pars_1353 ribB -68 5.5 TGTAAAAATCAGTTGACA
Pars_1350 arfB -81 5.6 TGTAAACAAAAGTTACCA
Pars_1351 arfA -56 5.6 TGGTAACTTTTGTTTACA
Pars_1351 arfA -23 3.7 TATAGCGAGTTGTTTACA
Pyrobaculum calidifontis JCM 11548
Pcal_1123 arfA -54 4.2 AGTCTCCAAGAGTTTACA
Pcal_1124 arfB -50 4.2 TGTAAACTCTTGGAGACT
Pcal_1121 ribB -51 6.1 TGTAAAAAATAGTTTACA
Pcal_1121 ribB -19 3.9 CCTCACCTAGAGTTGACA
Pyrobaculum islandicum DSM 4184
Pisl_0384 arfA -56 5.9 CGTAAACTAAAGTTTACA
Pisl_0383 arfB -50 5.9 TGTAAACTTTAGTTTACG
Pisl_0386 ribB -51 6.3 TGTAAACATTAGTTTACA
Thermoproteus neutrophilus V24Sta
Tneu_1743 arfA -56 6.1 TGTAAACAGAAGTTTACA
Tneu_1744 arfB -84 4.3 TGTAAACCTTAGTAGATA
Tneu_1744 arfB -51 6.1 TGTAAACTTCTGTTTACA
Tneu_1741 ribB -32 6.4 TGTAAACAATAGTTTACA
Tneu_1743 arfA -23 4.3 TATCTACTAAGGTTTACA
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Regulatory Sites [ FASTA format ] DOWNLOAD