Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Profile of regulator LexA in Bifidobacteriaceae

Properties
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Bifidobacteriaceae
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Bifidobacterium adolescentis ATCC 15703
BAD_0676 uvrB -87 5.8 TAGAACACATGTTCGA
BAD_1115 lexA -8 5.7 TCGAACAGATGTTTGA
BAD_1024 recA -190 5.7 TCGAACAGATGTTCGG
BAD_0804 ruvA -41 5.9 TCGAACAGATGTTCTA
BAD_0840 uvrA -78 5.6 TAGAACACCTGTTCGA
BAD_1008 lhr 25 5.5 TCGAACGTATGTACGA
BAD_1115 lexA -76 5.8 TCGAACAGCTGTTCTA
BAD_1115 lexA -60 5 TCGAACGCTTGTTCCA
BAD_1115 lexA -40 5.2 TGGCACATATGTTCGA
BAD_0522 dinP1 -110 5.7 TCGAACAGCCGTTCGA
BAD_0585 rarA -48 5.8 TCGAACGTGTGTTCGA
Bifidobacterium angulatum DSM 20098
BIFANG_00697 dinP2 -47 5.9 TCGAACAAGTGTTCGA
BIFANG_01139 uvrB -80 5.6 TGGAACAAATGTTCGA
BIFANG_01578 recA -229 5.7 TCGAACAAATGTTCGC
BIFANG_00990 lexA -113 5.9 TCGAACATCTGTTCTA
BIFANG_00990 lexA -97 5.6 TCGAACGTTTGTTCTA
BIFANG_01367 ruvA -29 6 TCGAACAGTTGTTCGA
BIFANG_01450 uvrA -82 5.8 GCGAACATCTGTTCGA
BIFANG_00973 dinP1 -41 6 TCGAACGTATGTTCGA
BIFANG_01557 lhr -8 5.8 TCGAACATATGTACGA
BIFANG_00990 lexA -43 5.7 TCGAACAAATGTTTGA
BIFANG_00990 lexA -77 5 TTGCACAGATGTTCGA
Bifidobacterium animalis subsp. lactis AD011
BLA_0934 recA -206 5.7 TCGAACAAATGTTCGC
BLA_0790 lexA -64 5.7 TCGAACATCTGTTTGA
BLA_1342 ruvA -33 5.8 CCGAACATATGTTCGA
BLA_0790 lexA -127 5.8 TCGAACAAATGTTCTA
BLA_0790 lexA -94 5.6 TCGCACATCTGTTCGA
BLA_1496 uvrB -67 5.6 TAGAACAGACGTTCGA
BLA_0349 dinP2 -29 5.1 TCGAACATCTGTTCAG
BLA_0950 lhr -8 5.7 TCGAACATATGTGCGA
BLA_1129 dinP1 -27 5.8 TCGAACGTTTGTTCGA
BLA_1204 rarA -56 6.1 TCGAACATTTGTTCGA
BLA_1372 uvrA -88 5.9 TCGAACAAGTGTTCGA
Bifidobacterium bifidum NCIMB 41171
BbifN4_010100002264 lexA -51 4.9 TCGAACGAATGTTTGT
BbifN4_010100006154 recA -246 5.5 TCGAACAGGTGTTCGC
BbifN4_010100004709 ruvA -169 5.4 TCGAACAGATGTTCTG
BbifN4_010100004854 uvrA -90 5.6 TCGAACTGATGTTCGA
BbifN4_010100002264 lexA -105 4.5 TAGAACAACTGTACTC
BbifN4_010100006079 lhr -8 5.1 TCGAATATATGTACGA
BbifN4_010100006359 dinP1 -61 4.6 TCGAACATATGTCTCA
BbifN4_010100002924 rarA -38 5.6 TCGAACCTATGTTCGA
Bifidobacterium breve DSM 20213
BIFBRE_01637 recA -157 5.7 TCGAACAAATGTTCGC
BIFBRE_01347 ruvA -36 6 TCGAACAGTTGTTCGA
BIFBRE_01804 lexA -67 5.7 TCGAACAGATGTTTGA
BIFBRE_01621 lhr 22 5.7 TCGAACATATGTGCGA
BIFBRE_01804 lexA -120 5.4 TCGAACATCTGTTCTT
BIFBRE_01804 lexA -100 5 TGGCACAAATGTTCGA
BIFBRE_01317 uvrA -106 6 TCGAACATGTGTTCGA
BIFBRE_00833 dinP1 -8 6.1 TCGAACAAATGTTCGA
BIFBRE_00563 rarA -39 5.9 TCGAACGTCTGTTCGA
BIFBRE_01804 lexA -136 5.6 TCGAACAAGTGTTCTA
Bifidobacterium dentium Bd1
BDP_0902 uvrB -58 5.7 TAGAACGTATGTTCGA
BDP_1421 recA -235 5.6 TCGAACAGATGTTCGT
BDP_1131 uvrA -82 5.6 TCGAACAGGTGTTCTA
BDP_1176 ruvA -151 5.9 TCGAACAGATGTTCTA
BDP_0412 dinP2 4 5.2 TCGAACATCTGTTTCA
BDP_1405 lhr -8 5.5 TCGAACGTATGTACGA
BDP_1556 lexA -286 5.7 TCGAACAGATGTTTGA
BDP_0721 dinP1 -75 5.9 TCGAACGGATGTTCGA
BDP_0795 rarA -21 5.8 TCGAACGTGTGTTCGA
Bifidobacterium gallicum DSM 20093
BIFGAL_00191 recA -152 5.7 TCGAACATTTGTTCGC
BIFGAL_00302 lexA -25 5.7 TCGAACATTTGTTCGC
BIFGAL_00302 lexA 11 5.6 TCGCACATTTGTTCGA
BIFGAL_01661 ruvA -125 5.8 GCGAACATCTGTTCGA
BIFGAL_01317 lhr -8 5 TCGAACATATGAGCGA
BIFGAL_01091 dinP1 -8 6.3 TCGAACATATGTTCGA
BIFGAL_01848 rarA -68 6.3 TCGAACATATGTTCGA
BIFGAL_01593 uvrA -102 6 TCGAACATGTGTTCGA
Bifidobacterium longum NCC2705
BL1415 recA -236 5.6 TCGAACAAATGTTCGT
BL0728 ruvA -50 6 TCGAACAGTTGTTCGA
BL1310 lexA -120 5.2 TCGAACAACTGTTCTT
BL1310 lexA -100 4.7 TGGCACAAACGTTCGA
BL1310 lexA -67 5.7 TCGAACAGATGTTTGA
BL1310 lexA -136 5.9 TCGAACAGATGTTCTA
BL1432 lhr -8 5.2 TCGTACATATGTACGA
BL1114 dinP1 -58 6.1 TCGAACAAATGTTCGA
BL0029 rarA -39 5.9 TCGAACGTCTGTTCGA
BL0702 uvrA -102 5.6 TCGAACAAGCGTTCGA
Bifidobacterium longum subsp. infantis ATCC 15697
Blon_0949 recA -173 5.6 TCGAACAGATGTTCGT
Blon_1157 ruvA -50 6.2 TCGAACAGATGTTCGA
Blon_0842 lexA -136 5.9 TCGAACAGATGTTCTA
Blon_0842 lexA -120 5.2 TCGAACAACTGTTCTT
Blon_0842 lexA -100 5 TGGCACAAATGTTCGA
Blon_0842 lexA -67 5.7 TCGAACAGATGTTTGA
Blon_0964 lhr -8 5.2 TCGTACATATGTACGA
Blon_1082 uvrA -204 5.6 TCGAACAAGCGTTCGA
Blon_1951 dinP1 -64 6.1 TCGAACAAATGTTCGA
Blon_0716 rarA -39 5.9 TCGAACGTCTGTTCGA
Gardnerella vaginalis 409-05
HMPREF0424_0243 dinP2 -107 5.6 TCGAACGTTTGTTCTA
HMPREF0424_1021 recA -179 5.7 TCGAACAAATGTTCGC
HMPREF0424_0837 ruvA -79 5.6 TAGAACAGATGTTCTA
HMPREF0424_0816 uvrA -92 5.6 TCGAACACTTGTTCTA
HMPREF0424_0572 lexA -114 4.9 TCGAACAGATGTATTA
HMPREF0424_0572 lexA -94 4.6 TGACACATTTGTTCGA
HMPREF0424_0572 lexA -62 5.7 TCGAACAGATGTTTGA
HMPREF0424_0826 rarA -38 5.6 TCGAACGTTTGTTCTA
HMPREF0424_0572 lexA -130 4.8 CTGAACATTTGTTCTA
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Regulatory Sites [ FASTA format ] DOWNLOAD