Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Profile of regulator HcpR in Clostridia-1

Properties
Regulator family: CRP
Regulation mode: activator
Biological process: Nitrosative stress response
Effector: Nitric oxide
Regulog: HcpR - Clostridia-1
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Clostridium acetobutylicum ATCC 824
CAC0758 null -133 4.6 TCGTAACGAAGGATACCG
CA_C3428 hcp -107 5.8 TAGTAACCAATGTTACAG
CAC0885 frdX -101 5.9 GTGTAACATATGTTACTG
CAC0884 hcpR -40 5.9 CAGTAACATATGTTACAC
CA_C2750 hcp -88 5.8 AAGTAACAATTGTTACGG
CAC0362 Cbei_4355 -83 5.9 TAGTAACATAAGTTACAG
Clostridium butyricum 5521
CBY_3927 null -98 6.2 CTGTAACTTATGTTACAG
Clostridium beijerincki NCIMB 8052
Cbei_1845 null -178 5.2 TTGTATCATATGTTACGT
Cbei_1434 hcp -223 5.5 GCGTAACCATTGTTACAG
Cbei_1434 hcp -128 5.8 TAGTAACGTATGTTACAG
Cbei_2276 hcp -126 5.2 TAGTAACGTGTGTTACAG
Cbei_4355 Cbei_4355 -82 5.8 TTGTAACTTTTGTTACAT
Clostridium botulinum A str. ATCC 3502
CBO1658 null -143 5 GAGTAACATCCGTTACAG
CBO2922 frdX -77 5.9 TGGTAACATTAGTTACAG
CBO2923 hcpR -45 5.9 CTGTAACTAATGTTACCA
CBO2792 hcp -122 6 TTGTAACATAGGTTACAG
CBO2926 null -110 5.7 TAGTAACATTAGTTACTG
Clostridium kluyveri DSM 555
CKL_0935 hcp -100 4.8 TCGTATCCTAAGTTACCG
CKL_2419 frdX -74 5.5 GTGTAACGTAAGTTACAG
CKL_2420 hcpR -67 5.5 CTGTAACTTACGTTACAC
Clostridium novyi NT
NT01CX_0589 frdX -89 5.5 TGGTAACTTAGGTTACAT
NT01CX_0590 hcpR -63 5.5 ATGTAACCTAAGTTACCA
NT01CX_0591 hcp -100 5.8 TGGTAACATAAGTTACAT
Clostridium perfringens ATCC 13124
CPF_1730 null -75 5.9 AGGTAACCTATGTTACAG
CPF_2909 hcp -141 5.6 AGGTAACTTTAGTTACCG
Clostridium tetani E88
CTC01608 null -79 5.7 TGGTAACTAATGTTACAT
CTC00410 hcp -106 6.1 TTGTAACATTTGTTACCG
CTC01972 frdX -93 5.6 ACGTAACATTCGTTACAG
CTC00896 hcpR -20 5.4 CAGTAACCATAGTTACTA
CTC00439 null -108 5.9 TAGTAACATAAGTTACAG
CTC00897 null -98 5.4 TAGTAACTATGGTTACTG
CTC02534 Cbei_4355 -73 5.4 TCGTAACATACGTTACTT
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Regulatory Sites [ FASTA format ] DOWNLOAD