Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Profile of regulator CblR in Thermococcales

Properties
Regulator family:
Regulation mode:
Biological process: Cobalamin biosynthesis
Effector:
Regulog: CblR - Thermococcales
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Pyrococcus abyssi GE5
PAB0025 cbiB -31 5 TTGGAGCTTTTATCCAA
PAB0349 btuF -30 4.8 CTGGACGAATAATCCAG
PAB2319 cobZ -48 5 TTGGATAAAAGCTCCAA
PAB2398 meaB -26 5.5 TTGGATAAATTCTCCAG
PAB2187 mutB_C -72 5.1 TGGGATAATATATCCAT
PAB1800 mutB_N -81 5.3 TTAGATAATTTATCCAA
PAB1230 sucD -62 5.6 TTGGATATTTAATCCAA
PAB2337 nrdD 58 5.5 TTGGATTTAATATCCAA
PAB2326 cobT -27 5 TTGGATAAAACCTCCAA
PAB1535 btuC -19 5 ATGGAATATTTGTCCAA
Pyrococcus furiosus DSM 3638
PF1774 btuF -29 5.2 TTGGATGATTAATCCAA
PF0836 cobS -25 5.1 TTGGATTAATTAGCCAG
PF1774 btuF -72 5.6 TTGGATTTTTTATCCAA
PF1947 meaB -26 5.5 TTGGATAATTTCTCCAG
PF1946 mutB_C -78 5.1 TAGGATAAAATGTCCAA
PF1477 mutB_N -83 4.6 GTGGATAAAAAAGCCAG
PF0233 sucD -71 5.6 TTGGATATTTAATCCAA
PF0296 cbiB -19 5.1 GCGGATAAAATATCCAA
PF1971 nrdD -99 5.2 ATGGATATTTTAGCCAA
PF1971 nrdD -29 5.6 TTGGACAAAATATCCAA
PF0303 cobT -27 5.3 ATGGATAAAAAATCCAT
PF0503 btuC -19 4.7 TTGGCATATTTGTCCAA
Pyrococcus horikoshii OT3
PH1659 btuF -74 5.3 TTGGACTTTTTATCCAT
PH1659 btuF -29 5.1 TTGGACGAATAATCCAA
PH0375 null -41 5.1 ATGGATAAAAACTCCAT
PH0376 cbiB -23 5.1 ATGGAGTTTTTATCCAT
PH0274 meaB -26 5.5 TTGGATAATTTCTCCAG
PH0275 mutB_C -61 4.9 CGGGATAAAATATCCAT
PH1306 mutB_N -77 4.9 TTGAACAAAATGTCCAA
PH1928 sucD -63 5.5 TTGGATATTTAGTCCAA
PH0021 nrdD -28 5.6 TTGGACAAAATATCCAA
PH0021 nrdD -99 5.8 TTGGATATTTTATCCAA
PH0034 cobT -19 5 TTGGACAAAATTTCCAT
PH0790 btuC -20 4.4 GTGGCATATTTATCCAA
Thermococcus gammatolerans EJ3
TGAM_2026 mmdA -98 5.1 GTGGACAAATTATCCAC
TGAM_1930 meaB -25 5.5 TTGGATAATTTCTCCAG
TGAM_1931 mutB_C -77 5.1 GTGGACAAAAAATCCAA
TGAM_1685 mutB_N -87 5.3 CTGGACTTTTTATCCAA
TGAM_0218 sucD -67 5.5 ATGGATAAAATATCCAT
TGAM_0480 btuF -17 5.4 CTGGACAATTAATCCAG
TGAM_0480 btuF -65 5 TTGGACGTTATATCCAA
TGAM_0542 null -41 4.8 ATGGATAAAAGCTCCAA
TGAM_0543 TGAM_0543 0 4.8 TTGGAGCTTTTATCCAT
TGAM_0534 cobT -27 4.9 CTGGATAAAAACTCCAC
TGAM_0161 nrdD -17 5.8 TTGGATAATTTATCCAG
TGAM_0535 cbiP -44 4.9 GTGGAGTTTTTATCCAG
TGAM_0096 btuR -27 5 TTGGAGGATTTATCCAT
TGAM_0422 nrdJ -187 5.3 ATGGACAAATTATCCGA
TGAM_2054 btuC -20 5 CTGGACAAAAACTCCAG
Thermococcus kodakaraensis KOD1
TK0329 meaB -27 5 CTGGATGATTAATCCAG
TK0328 mutB_C -87 5.5 CTGGACAAAATATCCAA
TK1149 mutB_N -89 5.6 ATGGACAATTTATCCAA
TK1880 sucD -69 5.2 ATGGATATAAAATCCAT
TK0862 null -42 5.1 ATGGATAAAAACTCCAT
TK0865 btuF -26 5 CCGGACAAATAATCCAG
TK0865 btuF -73 4.6 TTGGCCGTTTTATCCAA
TK0853 cobT -27 5 CTGGATAAAAAGTCCAC
TK2298 nrdD -35 5.8 TTGGATAAATTATCCAG
TK2298 nrdD -127 5.9 TTGGATAATTTATCCAA
TK2130 btuR -28 5.1 CTGGAGATTATGTCCAA
TK1736 nrdJ -198 5 ATGGATAATTCGTCCAG
TK2209 btuC -20 5.1 CTGGACAAAAAGTCCAG
Thermococcus onnurineus NA1
TON_0546 btuF -73 5 ATGGCCAAAATATCCAA
TON_1075 meaB -26 5.4 TTGGATAATTTGTCCGA
TON_1076 mutB_C -87 5.5 CTGGACAAAATATCCAA
TON_1110 mutB_N -88 5.5 CTGGACAATATATCCAA
TON_1664 null -29 5.1 GCGGATAAAATATCCAA
TON_0681 null -41 4.6 AAGGATAAAACATCCAA
TON_0546 btuF -26 5.3 ATGGACAAATAATCCAG
TON_0680 TGAM_0543 -18 4.6 TTGGATGTTTTATCCTT
TON_1870 nrdD -27 5.8 TTGGATAAATTATCCAG
TON_0688 cobT -27 4.8 TTGGATAAAACCTCCAT
TON_0687 cbiP -58 4.8 ATGGAGGTTTTATCCAA
TON_1529 btuR -31 4.4 CTGGCGATTATATCCAC
TON_1816 nrdJ -186 5.4 TTGGATAATTTGTCCGA
TON_1424 btuC -21 4.9 GTGGACAAATAATCCAC
Thermococcus sibiricus MM 739
TSIB_1577 btuF 56 5.6 TTGGACAAAATATCCAA
TSIB_1401 meaB -17 5.8 TTGGATAATTAATCCAA
TSIB_1402 mutB_C -87 5.7 ATGGATAAAATATCCAA
TSIB_0812 mutB_N -88 5.5 CTGGATAAAATGTCCAA
TSIB_1142 nrdJ -185 5.4 TTGGATAAAATATCCGA
TSIB_1460 btuC -24 5.6 TTGGATAAATAATCCAG
Export
Regulatory Sites [ FASTA format ] DOWNLOAD