Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Profile of regulator Aave_3430 in Comamonadaceae

Properties
Regulator family: GntR/MocR
Regulation mode:
Biological process:
Effector:
Regulog: Aave_3430 - Comamonadaceae
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Acidovorax avenae subsp. citrulli AAC00-1
Aave_3430 Aave_3430 -161 14.6 GCAGGCACAGGCGG-(11)-AGGAGAACAGTGCG-(9)-GCCTCTGTTATGGT-(11)-CTGTCTGTATCTGT
Aave_3431 null -151 20 ACAGATACAGACAG-(11)-ACCATAACAGAGGC-(9)-CGCACTGTTCTCCT-(11)-CCGCCTGTGCCTGC
Comamonas testosteroni KF-1
CtesDRAFT_4867 Aave_3430 -108 13.5 ACAGGCACAGCAAC-(11)-GGCGTAGCAGCGCG-(9)-GTATCTGTTCTGCT-(11)-CAATCTGTATCTGT
CtesDRAFT_5133 null -102 19.2 ACAGATACAGATTG-(11)-AGCAGAACAGATAC-(9)-CGCGCTGCTACGCC-(11)-GTTGCTGTGCCTGT
Delftia acidovorans SPH-1
Daci_5368 null 35 18.1 ACAGATACAGATCC-(11)-AGCACAACAGATCC-(9)-TGCACTGCTGCGAT-(11)-CGGGCTGTGCCTGT
Daci_5367 Aave_3430 -157 13 ACAGGCACAGCCCG-(11)-ATCGCAGCAGTGCA-(9)-GGATCTGTTGTGCT-(11)-GGATCTGTATCTGT
Polaromonas naphthalenivorans CJ2
Pnap_3431 Aave_3430 -118 16.2 ACAGCCACAGCCCG-(11)-ACCGGAACAGGCGT-(9)-GCATCTGTTATGGT-(11)-TCGGCTGTATCTGT
Pnap_3430 null -148 20.9 ACAGATACAGCCGA-(11)-ACCATAACAGATGC-(9)-ACGCCTGTTCCGGT-(11)-CGGGCTGTGGCTGT
Polaromonas sp. JS666
Bpro_2662 null -130 18.3 ACAGCCACAGATGG-(11)-ACCATAACAGATGG-(8)-CCATCTGTACCGAT-(11)-TTGATTGCCTCTGT
Bpro_2661 Aave_3430 -137 15.4 ACAGAGGCAATCAA-(11)-ATCGGTACAGATGG-(8)-CCATCTGTTATGGT-(11)-CCATCTGTGGCTGT
Variovorax paradoxus S110
Vapar_0983 Aave_3430 -120 14.2 ACAGGCACACACCC-(11)-ACCGGAACAGCGGT-(9)-GCATCTGTTATGGT-(11)-GCAACTGCATCTGT
Vapar_0984 null -140 21.4 ACAGATGCAGTTGC-(11)-ACCATAACAGATGC-(9)-ACCGCTGTTCCGGT-(11)-GGGTGTGTGCCTGT
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Regulatory Sites [ FASTA format ] DOWNLOAD