Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Profile of regulator HmgR in Pseudomonadaceae

Properties
Regulator family: IclR
Regulation mode: repressor
Biological process: Tyrosine degradation
Effector: Homogentisate
Regulog: HmgR - Pseudomonadaceae
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Pseudomonas aeruginosa PAO1
PA2010 hmgR -86 6.2 ATCGTAATTCAATTACGCA
PA2009 hmgA -93 6.2 TGCGTAATTGAATTACGAT
Pseudomonas entomophila L48
PSEEN4613 hmgR -92 6.4 ATCGTAATCAGATTACGAA
PSEEN4612 hmgA -116 6.4 TTCGTAATCTGATTACGAT
Pseudomonas fluorescens Pf-5
PFL_0966 hmgR -70 5 AACGTAATTTGATTGCCCA
PFL_0966 hmgR -90 6.3 ATCGTAATCCAATTACGCA
PFL_0967 hmgA -96 6.3 TGCGTAATTGGATTACGAT
Pseudomonas putida KT2440
PP4621 hmgA -42 6.4 TTCGTAATCTGATTACGAT
PP4622 hmgR -89 6.4 ATCGTAATCAGATTACGAA
Pseudomonas syringae pv. tomato str. DC3000
PSPTO3554 hmgB -62 4.7 TGCGTAATGTGGTTACAAA
PSPTO3551 hmgA -63 5.5 TGCGTAATTGTTTTACGAT
PSPTO3552 hmgR -84 5.5 ATCGTAAAACAATTACGCA
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Regulatory Sites [ FASTA format ] DOWNLOAD