Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Profile of regulator PrpR in Shewanellaceae

Properties
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Methylcitrate utilization
Effector: 2-methylcitrate
Regulog: PrpR - Shewanellaceae
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Shewanella oneidensis MR-1
SO0346 prpR -86 5.9 ATTGTCGACAAT
SO0346 prpR -256 5.9 ATTGTCGACAAT
SO0346 prpR -125 5.2 ATTGTTGACAAT
Shewanella putrefaciens CN-32
Sputcn32_3643 prpR -34 5.9 ATTGTCGACAAT
Sputcn32_3643 prpR -73 5.2 ATTGTTGACAAT
Sputcn32_3643 prpR -204 5.2 ATTGTTGACAAT
Shewanella sp W3-18-1
Sputw3181_3783 prpR -34 5.9 ATTGTCGACAAT
Sputw3181_3783 prpR -73 5.2 ATTGTTGACAAT
Sputw3181_3783 prpR -204 5.2 ATTGTTGACAAT
Shewanella sp ANA-3
Shewana3_3824 prpR -208 5.9 ATTGTCGACAAT
Shewana3_3824 prpR -77 5.2 ATTGTTGACAAT
Shewana3_3824 prpR -38 5.9 ATTGTCGACAAT
Shewanella sp MR-4
Shewmr4_3628 prpR -209 5.9 ATTGTCGACAAT
Shewmr4_3628 prpR -38 5.9 ATTGTCGACAAT
Shewmr4_3628 prpR -77 5.2 ATTGTTGACAAT
Shewanella sp MR-7
Shewmr7_0316 prpR -38 5.9 ATTGTCGACAAT
Shewmr7_0316 prpR -209 5.9 ATTGTCGACAAT
Shewmr7_0316 prpR -77 5.2 ATTGTTGACAAT
Shewanella baltica OS155
Sbal_4046 prpR -34 5.9 ATTGTCGACAAT
Sbal_4046 prpR -73 5.2 ATTGTTGACAAT
Sbal_4046 prpR -204 5.2 ATTGTTGACAAT
Shewanella denitrificans OS217
Sden_1663 prpR -87 5.5 TTTGTCGACAAT
Sden_1663 prpR -65 4.5 ATTGTTGACCAT
Sden_1663 prpR -35 5.4 ATTGTCGACAAC
Shewanella frigidimarina NCIMB 400
Sfri_1856 prpR -65 5.4 ATTGTCGACAAC
Sfri_1856 prpR -117 5.5 ATTGTCGACAAA
Shewanella amazonensis SB2B
Sama_3293 prpR -83 5.2 ATTGTTGACAAT
Sama_3293 prpR -228 4.8 GTTGTTGACAAT
Shewanella loihica PV-4
Shew_1819 prpR -292 5.5 TTTGTCGACAAT
Shew_1819 prpR -92 5.5 TTTGTCGACAAT
Shew_1819 prpR -40 5.4 ATTGTCGACAAC
Shew_0280 prpR -150 4.4 GTTGTCAACAAA
Shew_0280 prpR -54 5.2 ATTGTTGACAAT
Shewanella pealeana ATCC 700345
Spea_2323 prpR -93 5.5 TTTGTCGACAAT
Spea_2323 prpR -71 4.5 ATTGTTGACTAT
Spea_2323 prpR -41 5.9 ATTGTCGACAAT
Shewanella halifaxensis HAW-EB4
Shal_1960 prpR -41 5.9 ATTGTCGACAAT
Shal_1960 prpR -71 5.2 ATTGTTGACAAT
Shal_1960 prpR -93 5.5 TTTGTCGACAAT
Shewanella piezotolerans WP3
swp_2427 prpR -92 5.5 TTTGTCGACAAT
swp_2427 prpR -40 5.9 ATTGTCGACAAT
Shewanella sediminis HAW-EB3
Ssed_4175 prpR -188 5.2 ATTGTCAACAAT
Ssed_2110 prpR -38 5.9 ATTGTCGACAAT
Ssed_2110 prpR -91 5.5 TTTGTCGACAAT
Ssed_4175 prpR -16 4.5 ATTGTCAACCAT
Ssed_4175 prpR -56 4.9 ATTGTTGACAAA
Shewanella woodyi ATCC 51908
Swoo_2500 prpR -92 5.9 ATTGTCGACAAT
Swoo_2500 prpR -40 5.9 ATTGTCGACAAT
Export
Regulatory Sites [ FASTA format ] DOWNLOAD