Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Profile of regulator Daci_0595 in Comamonadaceae

Properties
Regulator family: GntR/MocR
Regulation mode:
Biological process: Metabolite transport
Effector:
Regulog: Daci_0595 - Comamonadaceae
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Acidovorax avenae subsp. citrulli AAC00-1
Aave_4435 PF01810 -130 15.1 GAACTGTGTTG-(10)-CGGCACAGTTC-(15)-TGTCTGTATTG-(0)-GCACTGTAGCG
Acidovorax sp. JS42
Ajs_3843 PF01810 -125 15.8 GCACTGTGCCA-(10)-CGATACAGTGC-(16)-TGACTGTATTG-(0)-GTACTGTAATG
Comamonas testosteroni KF-1
CtesDRAFT_4335 COG1167 -369 15 GAACTGTATTG-(10)-CAATACAGAAG-(15)-TGTCTGTATAG-(0)-GTACTGTAATG
CtesDRAFT_1190 PF01810 -121 17.6 AAAGTGTCAGG-(10)-CAGGCCAGCTC-(15)-AAAGTGTACCG-(0)-ATAGTGTACTG
Delftia acidovorans SPH-1
Daci_0594 PF01810 -175 15.5 TCACTGTATCG-(10)-CAATACAGAAC-(15)-CAACTGTATTG-(0)-GCACTGTACAG
Daci_3667 PF01810 -142 18 CAAGTGTCAGG-(10)-CAGGCCAGTTG-(15)-AAAGTGTACTG-(0)-CTACTGTACCG
Methylibium petroleiphilum PM1
Mpe_A0184 PF00892 -93 15.8 GGCGTGTGTCG-(10)-CAGTACAGATC-(15)-ATTCTGTACTG-(0)-TTAGTGTATTG
Polaromonas naphthalenivorans CJ2
Pnap_0402 PF00892 -197 16.4 GCCGTGTGCTG-(10)-CAATACAGTTT-(15)-AAACTGTATTG-(0)-GTGGTGTGCTG
Polaromonas sp. JS666
Bpro_4234 PF01810 -92 17 TAAGTGTGCCG-(10)-CAATACAGTTT-(15)-CAACTGTATTG-(0)-GTAGTGTGCTG
Rhodoferax ferrireducens DSM 15236
Rfer_3726 PF01810 -114 17 AACCTGTGTTG-(10)-CAATACAGCTC-(15)-CAAGTGTACTG-(0)-CCAGTGTATTG
Variovorax paradoxus S110
Vapar_0747 PF01810 -93 16.4 CTTCTGTGTCG-(10)-CAATACAGTTT-(15)-CAACTGTATCG-(0)-GAACTGTAATG
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Regulatory Sites [ FASTA format ] DOWNLOAD