Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Profile of regulator GlmR in Shewanellaceae

Properties
Regulator family: DeoR
Regulation mode: repressor
Biological process: Lipopolysaccharide biosynthesis
Effector: Glucosamine-6-phosphate
Regulog: GlmR - Shewanellaceae
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Shewanella oneidensis MR-1
SO_4742 glmR -33 6.6 ACCTTTCGAATCGAAAGTT
Shewanella putrefaciens CN-32
Sputcn32_3952 glmR -33 6.6 ATCTTTCGAATCGAAACTT
Shewanella sp W3-18-1
Sputw3181_4049 glmR -33 6.6 ATCTTTCGAATCGAAACTT
Shewanella sp ANA-3
Shewana3_4126 glmR -33 6.9 AACTTTCGAATCGAAAGTT
Shewanella sp MR-4
Shewmr4_3921 glmR -21 6.9 AACTTTCGAATCGAAAGTT
Shewanella sp MR-7
Shewmr7_4013 glmR -33 6.9 AACTTTCGAATCGAAAGTT
Shewanella baltica OS155
Sbal_4362 glmR -33 6.6 ATCTTTCGAATCGAAACTT
Shewanella denitrificans OS217
Sden_3744 glmR -40 6.2 ATCTTTCGCTTCGAAACTT
Shewanella frigidimarina NCIMB 400
Sfri_4041 glmR -41 6.4 ATCTTTCGTTTCGAAACTT
Shewanella amazonensis SB2B
Sama_3640 glmR -35 6.8 ATCTTTCGATTCGAAAGTT
Shewanella loihica PV-4
Shew_3840 glmR -33 6.4 ATCTTTCGAAACGAAACTT
Shewanella pealeana ATCC 700345
Spea_4235 glmR 4 6.2 ATCTTTCGAACCGAAACTT
Shewanella halifaxensis HAW-EB4
Shal_4286 glmR -32 6.1 TTCTTTCGAATCGAAACTT
Shewanella piezotolerans WP3
swp_5149 glmR -32 6.4 ATCTTTCGAAACGAAACTT
Shewanella sediminis HAW-EB3
Ssed_4482 glmR -33 6.2 ACCTTTCGAAACGAAACTT
Shewanella woodyi ATCC 51908
Swoo_4893 glmR -33 6.4 ATCTTTCGAAACGAAACTT
Export
Regulatory Sites [ FASTA format ] DOWNLOAD