Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Profile of regulator AraR in Shewanellaceae

Properties
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Arabinose utilization
Effector: Arabinose
Regulog: AraR - Shewanellaceae
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Shewanella putrefaciens CN-32
Sputcn32_2048 omp(Ara) -503 5.4 ATGTAATACAATACTACTG
Sputcn32_2047 abnA -88 5.4 CAGTAGTATTGTATTACAT
Sputcn32_2063 arb43 -45 6.1 TGGTATTACTATAATACTA
Sputcn32_2062 araC -178 6.1 TAGTATTATAGTAATACCA
Sputcn32_2068 araB -80 6.1 TAGTAGTATTGTAGTACTA
Sputcn32_2068 araB -107 5.3 AAATAATATTGTAATACCA
Shewanella sp W3-18-1
Sputw3181_1964 omp(Ara) -504 5.4 ATGTAATACAATACTACTG
Sputw3181_1965 abnA -88 5.4 CAGTAGTATTGTATTACAT
Sputw3181_1949 arb43 -45 6.1 TGGTATTACTATAATACTA
Sputw3181_1950 araC -178 6.1 TAGTATTATAGTAATACCA
Sputw3181_1944 araB -80 6.1 TAGTAGTATTGTAGTACTA
Sputw3181_1944 araB -107 5.3 AAATAATATTGTAATACCA
Shewanella sp ANA-3
Shewana3_2085 omp(Ara) -520 5.8 AAGTAATACAATACTACTG
Shewana3_2086 abnA -85 5.8 CAGTAGTATTGTATTACTT
Shewana3_2069 arb43 -45 6 TGGTATTACTATAATACCA
Shewana3_2070 araC -123 6 TGGTATTATAGTAATACCA
Shewana3_2064 araB -81 6.1 TAGTAATATTGTAGTACTA
Shewana3_2064 araB -108 4.8 AAATCATATTGTATTACTA
Shewanella sp MR-4
Shewmr4_1998 omp(Ara) -521 5.8 AAGTAATACAATACTACTG
Shewmr4_1999 abnA -85 5.8 CAGTAGTATTGTATTACTT
Shewmr4_1982 arb43 -45 6 TGGTATTACTATAATACCA
Shewmr4_1983 araC -150 6 TGGTATTATAGTAATACCA
Shewmr4_1977 araB -81 6.1 TAGTAATATTGTAGTACTA
Shewmr4_1977 araB -108 4.8 AAATCATATTGTATTACTA
Shewanella sp MR-7
Shewmr7_1977 omp(Ara) -521 5.8 AAGTAATACAATACTACTG
Shewmr7_1976 abnA -85 5.8 CAGTAGTATTGTATTACTT
Shewmr7_1992 arb43 -45 6 TGGTATTACTATAATACCA
Shewmr7_1991 araC -150 6 TGGTATTATAGTAATACCA
Shewmr7_1997 araB -81 6.1 TAGTAATATTGTAGTACTA
Shewmr7_1997 araB -108 4.8 AAATCATATTGTATTACTA
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Regulatory Sites [ FASTA format ] DOWNLOAD