Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Profile of regulator AraC in Enterobacterales

Properties
Regulator family: AraC
Regulation mode: activator (repressor)
Biological process: Arabinose utilization
Effector: Arabinose
Regulog: AraC - Enterobacterales
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Citrobacter koseri ATCC BAA-895
CKO_03318 araC -204 8.3 TGTGGACATTTCTGTCG-(4)-TATAGACACTTTTGTTA
CKO_03318 araC -278 8.1 TCAGGCAGGATCCGCTA-(4)-TATGGATTAAAATGCTA
CKO_01050 araF -210 7.1 TATGTCATTTTCCGCTG-(4)-TATGTACGCAATTACTG
CKO_01050 araF -231 6.3 TCTGACAAAACCTTCTT-(4)-TATGTCATTTTCCGCTG
CKO_03603 ytfQ -189 7.5 TGACAGGAAAATCCATA-(4)-CAGCTGCTTTTTTCATA
CKO_03319 araB -100 8.1 TAGCATTTTAATCCATA-(4)-TAGCGGATCCTGCCTGA
CKO_03319 araB -174 8.3 TAACAAAAGTGTCTATA-(4)-CGACAGAAATGTCCACA
CKO_01050 araF -284 8.3 CAAGGATTTGCTGGCTG-(4)-TATGGACTAATCTGCTA
Enterobacter sp. 638
Ent638_0412 ytfQ -189 7.3 TGACAGGAAAATCCATA-(4)-TAGCCACATATTCAATG
Ent638_0610 araB -172 8.6 TAACAAAAGTGTCTATA-(4)-CGGCAGAAATGTCCACA
Ent638_3294 araE -179 4.6 TATAAATTAAGTATTTA-(4)-TAAATGATGATTATTCA
Ent638_3294 araE -158 4.8 TAAATGATGATTATTCA-(4)-AAGTTTAAATTGGAATA
Ent638_0611 araC -276 8.1 TCAGGCAGGATCCGCTA-(4)-TATGGATTAAATTGCTG
Ent638_2476 araF -208 7.1 TATGTCATTTCTCGCTG-(4)-TATGCACGCAATTACTG
Ent638_2476 araF -283 7.6 CAGGGACTTCTTAGCTG-(4)-TATGGATAATCTTGCTT
Ent638_0611 araC -202 8.6 TGTGGACATTTCTGCCG-(4)-TATAGACACTTTTGTTA
Ent638_0610 araB -98 8.1 CAGCAATTTAATCCATA-(4)-TAGCGGATCCTGCCTGA
Erwinia amylovora ATCC 49946
EAM_1697 araB -99 6.3 CGACAGAAAAATACATA-(4)-TAGCCTGCTCAACCTAA
EAM_1697 araB -174 8.3 CAGCTGATTTATCCATA-(4)-CAGCAAATTTAACCTTT
EAM_1698 araF -224 8.3 AAAGGTTAAATTTGCTG-(4)-TATGGATAAATCAGCTG
EAM_1698 araF -299 6.3 TTAGGTTGAGCAGGCTA-(4)-TATGTATTTTTCTGTCG
Erwinia carotovora subsp. atroseptica SCRI1043
ECA2274 araB -101 6.4 CGACAGAAAAATACATA-(4)-TAGCTAACCACTCCTAA
ECA2273 araF -310 6.4 TTAGGAGTGGTTAGCTA-(4)-TATGTATTTTTCTGTCG
ECA2273 araF -235 7.1 ATTGGTTAAATTTGCTA-(4)-TATGCACAAACCTGTCA
ECA2274 araB -176 7.1 TGACAGGTTTGTGCATA-(4)-TAGCAAATTTAACCAAT
Escherichia coli str. K-12 substr. MG1655
b1901 araF -284 8.6 CAAGGATTTCCAGGCTA-(4)-TATGGATTAATCTGCTG
b0063 araB -99 8 TAGCATTTTTATCCATA-(4)-TAGCGGATCCTACCTGA
b0063 araB -173 8.7 TAACAAAAGTGTCTATA-(4)-CGGCAGAAAAGTCCACA
b4227 ytfQ -188 7.8 GAGCAGGAAAATCCATA-(4)-TAGCCGCATTTTTCATA
b1901 araF -209 7.6 TATGTCTTTTCCCGCTA-(4)-TATGCACGTTCTCACTG
b0064 araC -277 8 TCAGGTAGGATCCGCTA-(4)-TATGGATAAAAATGCTA
b0064 araC -203 8.7 TGTGGACTTTTCTGCCG-(4)-TATAGACACTTTTGTTA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
KPN_02396 araF -282 8.3 CAAGGATAAGCCTGCTG-(4)-TATAGATGATCCTGCTA
KPN_00063 araC -203 8.7 TGTGGACTTTTCTGCCG-(4)-TATAGACACTTTTGTTA
KPN_03264 araE -159 7.5 CAGCAATATAGTCCATA-(4)-TGGCTTATCCTGCCTGA
KPN_02396 araF -207 7.2 TATGTCATTTTTTGCTA-(4)-TATGTACGCAATTACTG
KPN_00062 araB -172 8.7 TAACAAAAGTGTCTATA-(4)-CGGCAGAAAAGTCCACA
KPN_00062 araB -98 8.5 CAGCAAAATAATCCATA-(4)-TAGCGAATCCGGCCTGA
KPN_04622 ytfQ -324 7.4 TGACATGAAAATCCATA-(4)-TAGCCACATCATGAATA
KPN_03264 araE -73 4.9 TGGCAGGAAAAAAATGA-(4)-AATCAGTAACGACTCTA
KPN_00063 araC -277 8.5 TCAGGCCGGATTCGCTA-(4)-TATGGATTATTTTGCTG
KPN_01860 araJ -310 4.4 GGACGGTAAAGGCGACA-(4)-TAAAACCGACATCAACA
Salmonella typhimurium LT2
STM0104 araC -205 8.4 TGTGGACATTCCAGCCA-(4)-TATAGACACTTCTGTTA
STM0104 araC -279 8.1 TCAGGCAGGATCCGCTA-(4)-TATGGACAAAAATGCTA
STM3016 araE -99 6.9 TAGCCATTTAATCCATA-(4)-TGCCGTTTCCAGCCTGA
STM0103 araB -173 8.4 TAACAGAAGTGTCTATA-(4)-TGGCTGGAATGTCCACA
STM0103 araB -99 8.1 TAGCATTTTTGTCCATA-(4)-TAGCGGATCCTGCCTGA
STM0394 araJ -134 7.1 TAGCATAATAATGAATA-(4)-AAGACGGATAAGGAATG
Serratia proteamaculans 568
Spro_2244 araB -100 7.1 AAGCAGAAAAGTGCATA-(4)-CAGCTAACGGCTCCTCA
Spro_2244 araB -175 7.5 CAGCAGATATGTGCATA-(4)-TAGCGAATTCCGCCAAG
Spro_2245 araF -224 7.5 CTTGGCGGAATTCGCTA-(4)-TATGCACATATCTGCTG
Spro_2245 araF -299 7.1 TGAGGAGCCGTTAGCTG-(4)-TATGCACTTTTCTGCTT
Yersinia pestis KIM
y2096 araF -256 7.8 CGAGGTTAAATTTGCTG-(4)-TATGGATAAATAAACTG
y2095 araB -114 7.5 AAGCAGAAAAGTGCATA-(4)-CAGCTATTGGCTCCTCA
y2096 araF -331 7.5 TGAGGAGCCAATAGCTG-(4)-TATGCACTTTTCTGCTT
y2095 araB -189 7.8 CAGTTTATTTATCCATA-(4)-CAGCAAATTTAACCTCG
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Regulatory Sites [ FASTA format ] DOWNLOAD