Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Profile of regulator HTCS_Rgu-2 in Bacteroidaceae

Properties
Regulator family: [Other]
Regulation mode: activator
Biological process: Rhamnogalacturonides utilization
Effector:
Regulog: HTCS_Rgu-2 - Bacteroidaceae
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Bacteroides dorei DSM 17855
BACDOR_00395 rhaH -108 8.9 TGAACGAATAAACA-(6)-TGAATGAATTTCTA
BACDOR_00405 BT2958 -85 9.3 TGGACGAATTTCCA-(6)-TGTATCTTATTCTA
BACDOR_00375 ramA -88 9.6 TGAACAATATTCCA-(6)-TGAATAAAATTCCA
BACDOR_03323 BT4156 -69 9.2 TGTATCATTTTTCA-(6)-TGTATGATTTTCCA
BACDOR_00368 bguA -94 9.3 TATACGAATTTCCA-(6)-TGTACTTCTTTCTA
BACDOR_00393 BT2680 -87 9 TGAACGAATTTCTA-(6)-TGTATCTTATTCTA
BACDOR_00371 rhiN2 -91 8.7 TGCATAATATTCAA-(6)-TGTACACATTTCCA
BACDOR_01719 susC_Ara-3 -118 7.7 TAGAGTATTCAACA-(6)-TGTACAATAATCCA
Bacteroides ovatus ATCC 8483
BACOVA_02777 BT2958 -79 8.7 TGAACGAAATTCTA-(6)-TGTACATGATTCTA
BACOVA_04950 bguA -141 8.2 TGGACAATATTTCA-(6)-TGTAGTTTTGTACA
BACOVA_04967 BT4172 -89 8.7 TGAACGAATCGCCA-(6)-TGGATAATATTCTA
BACOVA_04974 BT4175 -93 8.3 TGATGATTTCTACA-(6)-TGTACAATATTCTA
BACOVA_04951 BVU_0180 -108 8.7 TGTACAAAACTACA-(6)-TGAAATATTGTCCA
BACOVA_04950 bguA -83 8.5 GATACAATATTCTA-(6)-TGTACATCTTTCTA
BACOVA_04973 rhiN2 -115 8.4 TGAACGAATTTAAA-(6)-TGCACGGAAATCCA
BACOVA_05029 BACOVA_05029 -113 7 TGGAAAAAATGACA-(6)-TGGATAATAATCCT
BACOVA_02709 BT4163 -235 7.2 TGAATCAGAATACA-(6)-TGTACAGTAATTAA
Bacteroides plebeius DSM 17135
BACPLE_03588 pehX4 -150 8.7 TGTACAAAAAGACA-(6)-TGCATGATTCTCTA
BACPLE_03132 rhaH -93 8.9 TGTACAAAAGCACA-(6)-TGTACGATATTCCA
BACPLE_00503 bguA -96 8.5 TACACAATATTCCA-(6)-TGAAGAATTATCGA
BACPLE_00251 BT4172 -92 9.7 TATACAAATTTACA-(6)-TGTACAATACTCCA
BACPLE_00253 BT4147 -96 8.6 TGTATGATAATCGA-(6)-TGTATAATAATCCA
BACPLE_03595 ramA -136 8 CGTACAAAAATCCA-(6)-TGTACATTCCTATA
Bacteroides thetaiotaomicron VPI-5482
BT2680 BT2680 -111 7.5 GATTCATTTTTAAA-(6)-TGAACAAATCTCTA
BT4174 rhiN2 -117 9.2 TGGACAAATTTAAA-(6)-TGGACAATATTCCA
BT4151 bguA -111 8.5 GATACAATATTCTA-(6)-TGTACATCTTTCTA
BT4172 BT4172 -123 9.6 TGAACAAATATCCA-(6)-TGAATGATATTCTA
BT4175 BT4175 -183 6.5 TGGAATATTGTCCA-(6)-TTTAAATTTGTCCA
BT4182 HTCS_Rgu-2 -253 8 TAAACAAATATTCT-(6)-GGAAGTTTTTTCCA
BT4152 abnC -128 8.2 TGTACGAAACTACA-(6)-TGATAATATCTCCA
BT4163 BT4163 -263 7.2 GGCGGTATTTTCCA-(6)-TGTACGATTCTTCA
Bacteroides vulgatus ATCC 8482
BVU_0154 BT2958 -85 9.3 TGGACGAATTTCCA-(6)-TGTATCTTATTCTA
BVU_0181 bguA -94 9.3 TATACGAATTTCCA-(6)-TGTACTTCTTTCTA
BVU_0174 ramA -88 9.6 TGAACAATATTCCA-(6)-TGAATAAAATTCCA
BVU_0162 BT2680 -87 9 TGAACGAATTTCTA-(6)-TGTATCTTATTCTA
BVU_1768 BT4156 -69 9.2 TGTATCATTTTTCA-(6)-TGTATGATTTTCCA
BVU_0160 rhaH -108 8.9 TGAACGAATAAACA-(6)-TGAATGAATTTCTA
BVU_0178 rhiN2 -94 8.7 TGCATAATATTCAA-(6)-TGTACACATTTCCA
BVU_1005 susC_Ara-3 -91 7.7 TAGAGTATTCAACA-(6)-TGTACAATAATCCA
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Regulatory Sites [ FASTA format ] DOWNLOAD